Microterricola viridarii: AWU67_10030
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Entry
AWU67_10030 CDS
T04252
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mvd
Microterricola viridarii
Pathway
mvd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWU67_10030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvd03019
]
AWU67_10030
03400 DNA repair and recombination proteins [BR:
mvd03400
]
AWU67_10030
Enzymes [BR:
mvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWU67_10030
Messenger RNA biogenesis [BR:
mvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWU67_10030
DNA repair and recombination proteins [BR:
mvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWU67_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
HEM4
Zn_ribbon_TFIIB
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AMB60472
UniProt:
A0A0Y0PCX4
LinkDB
All DBs
Position
2172283..2174445
Genome browser
AA seq
720 aa
AA seq
DB search
MRPAALAALRALVGRPDADFHDGQFEAIQALVAERRRALVVQRTGWGKSAVYFVATKLLR
DAGAGPTILVSPLLALMRDQVAAAARAGVRAVSINSANAHEWGAVLEQLRTDEVDVLLVS
PERLNNPRFRDEQLPALIDRVGLLVVDEAHCISDWGHDFRPDYRRLRELIAEMPACVPVL
ATTATANSRVVTDVAEQLSVAAQHDSAPAAPVLTIRGPLARASLRLGVLRLPDAKARLAW
LLSHLAELPGSGIIYSLTVAAAEDTARLLREAGHTVHAYTGQTDTDEREALEGQLKRNEI
KALVATSALGMGFDKPDLGFVLHLGAPSSPVAYYQQVGRAGRATDNADVLLLPGVEDEAI
WTYFATSSMPDEEKAQAVLAALAQSERPLSTPALEAIVDLRRSRLELLLKVLDVDGAVRR
VQGGWSSTGQPWVYDRERYTRIAAERVAEQRSMIEYERTGDCRMAFLQRALDDDTAVPCG
RCDNCAGVWYPVDVAEDAAASASASLDRVGVAIEPRAQWPTGVASLGVPVKGNIPPGERL
EAGRALARLSDLGWGGPLRALFAPTATAPGEPESLGAASNDAPATPAMLQACVRVLAEWG
WEERPAAVVAMPSRRHPQLVDSVARAISERGRLPLLGTLDWANGGPTGGSGGNSAYRLSN
VWDRFSVGPELAAALEQFSGRPILLVDDIADSRWSLTVAGRLLRQHGAGAVLPFTLALQG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atccgccccgccgcactcgccgcgctgcgtgccctggtcggccgtccggacgccgacttc
cacgacggccagtttgaggcgattcaggccctcgtcgccgaacgccgccgcgccctcgtc
gtgcagcgcaccgggtggggcaagtccgcggtgtacttcgtcgcgacgaagttgctccgc
gacgccggggcggggcccaccatcctcgtctcgccgctgctcgccctcatgcgcgaccag
gtcgccgccgccgcccgcgccggcgtgcgcgccgtctcgatcaactcggcaaacgcccac
gagtggggcgccgtgctcgaacagctgcgcaccgacgaggtcgacgtgctgttggtctcc
cccgagcgtctgaacaacccgcgcttccgcgacgagcagcttccggcactgatcgaccgg
gtcggcctgctcgtggtcgatgaggcacactgcatcagcgactggggccacgacttccgg
cccgactaccggcgcctgcgcgaactgatcgccgagatgccggcttgcgtgccggtgctg
gcgacgacggcgaccgccaacagccgagtggtgacggatgtcgccgagcagctctcggtg
gccgcccagcacgactcggcgcccgccgcgccggttctcacgatccgcggaccgctcgcg
cgcgcgtcgctgcgactcggcgtattgcggctgcccgacgcgaaagcccgcctcgcctgg
ctgctcagccacctcgccgagctgcccggcagcggcatcatctactcgctcaccgtcgcc
gcggcagaggacaccgcccggctgctgcgcgaggccggccacaccgtgcacgcctacacc
gggcagaccgacaccgacgagcgggaggccctcgagggccagctgaagcgcaacgagatc
aaggcgctcgtcgccaccagcgcgctcggcatgggattcgacaagcccgacctcggcttc
gtgctgcacctgggcgccccctcctcgcccgtcgcctactaccagcaggtcggccgtgcc
ggccgcgccaccgacaacgccgacgtgttgctgctgcccggcgtcgaggacgaggcgatc
tggacctacttcgccacctcctcgatgcccgacgaagaaaaggcccaggccgtgctcgcc
gcgctcgcacagagcgagcggcctctctccaccccggcgctggaggcgatcgttgacctg
cgccgctcccggctggagctgctgctcaaagtgctcgacgtcgacggcgccgtgcgccgc
gtgcagggcggctggagctccaccggccagccctgggtctacgaccgggagcgttacacc
cgtattgctgcagagcgcgtcgccgagcagcgctccatgatcgaatacgagcgcaccggc
gactgccggatggcgttcctgcagcgcgccctcgacgacgacaccgctgtgccctgcggg
cgctgcgacaactgtgcgggcgtctggtacccggtcgacgtggccgaggatgccgctgcc
agcgcgagtgcctccctcgaccgggtcggcgtggccatcgaaccgcgcgctcagtggccc
accggggtggcctcgctcggcgtgccggtgaagggcaatatcccgcccggcgagcggctc
gaagccggccgggcgctggcccggctgagcgaccttggctggggcggcccgctgcgggcg
ctcttcgcaccgaccgccactgcgccgggcgagccggaatccttgggagccgcctcgaac
gacgccccggcaaccccggccatgctgcaggcctgcgtgcgcgtgctcgccgagtggggc
tgggaggaacgcccggccgcggtcgtcgcgatgccgtcgcgccggcatccgcagctcgtc
gactcggtcgcccgcgcgatctcggaacggggccggctgccgctgctcggcaccctggac
tgggcgaacggcgggccgaccggcggctccggcggcaacagcgcctaccggctctccaac
gtctgggatcgcttcagtgtcggaccggagctcgccgccgcgctggagcagttcagcggc
cgcccgatcctgctcgtcgacgacatcgccgacagccggtggagcctgaccgtcgccggg
cggctgctgcgccagcacggcgccggcgcggtgctgccgttcacgctagcgctgcagggc
tga
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