Mannheimia varigena USDA-ARS-USMARC-1388: X875_10790
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Entry
X875_10790 CDS
T03029
Name
(GenBank) bifunctional amino acid-binding protein/DNA-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve02010
ABC transporters
mve02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X875_10790
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X875_10790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mve02000
]
X875_10790
Transporters [BR:
mve02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
X875_10790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Peripla_BP_6
Peripla_BP_5
Sigma70_ECF
Sigma70_r4_2
HTH_11
ANF_receptor
HTH_40
HTH_10
HTH_23
HTH_38
CofD
HTH_29
HTH_24
HTH_7
B12-binding
HTH_28
PF0610-like_N
HTH_20
HTH_36
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AHG79697
LinkDB
All DBs
Position
1133752..1135491
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AA seq
579 aa
AA seq
DB search
MIENSQWSCLINKQGEVLEWENKTGAEYLTQLKQLCLYAQAFLYSDQTSSSFFYCLSNQY
WLKVLLKRHQEFTLIHAEQSKLPFELSKREIELLTLVSSGLSNEEIANELNISKRTVDKH
IENIFSKTKTESRTLLAVFAITEHLICLPTPGKLEQSILATFKIEQLALQIANEKRPLVM
DEPATFSINRYNYRPIILGVPYVEQGIGQIDTRELLNGTQLAVENINRQGGINGREVQIA
TAGFCVEDKPSILNAYNALLDQEVDAISTAYACYLPEVHELIATESIPYLHIATHSGSNK
LAQNLPNKRIENMFQVCASDVTYSLGILNFLQYYRYYYADFMQNKTVMIVSVKWQKVDIG
IDNLSHNLHKQGWNIEYVELEQEPTAYQHLMKQIHNVSPSIIVLASYFAEDIVHFHQAFI
ENPTNAIIYSIYAPSAFLPHEQPCEGVLWSTNSGLSDNFLGRQFCQCYEQLFERKPTYSQ
ASIAYDQVNILANAWKQSVSPRHFKAVSNIIRQQPHYGVNGTYYFNTDSQIGLTYPETKD
LSISLPQLIYQIQQGRSAVIAPELFADSQFVLPTWFSYK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaatagtcaatggtcttgcttaattaataagcaaggcgaggttttagaatgg
gaaaataaaacaggggcagagtatttaactcagttaaaacaactctgcctctatgctcaa
gcctttctctattcagatcagacatcatcgtcttttttctattgtttgtctaaccagtat
tggctgaaggttctgttaaaacgccatcaagagttcacattaatacatgcagagcagagc
aaattaccatttgaactgagcaagcgagaaattgagttattaacgttagtcagcagtggg
cttagcaatgaagaaattgccaatgaactgaatattagtaagcgtactgttgataaacat
attgaaaatattttctctaaaacgaaaacagaaagtcgaactttgctggctgtttttgcc
attacagaacacttaatctgcttaccaacaccaggcaagctagaacaatctattcttgct
acctttaaaatcgaacaactcgccttgcaaattgcaaacgaaaaacgaccgcttgtaatg
gatgagcctgcaactttttcgattaatcgttataactatcgccctattattcttggtgtg
ccttatgtagaacaggggataggtcaaattgatactagagagttactcaatggtacgcaa
cttgcggtagaaaatataaatcggcaaggcggtattaatgggcgagaagtacaaattgcc
acagccggtttttgtgtagaggataaacccagcatattaaatgcttataatgcgttgttg
gatcaagaagttgatgcgatttctaccgcctatgcttgttatttgcccgaagttcacgaa
ctcattgcaaccgaaagcatcccttatttacatattgccactcatagcggttcaaataaa
cttgcacaaaatttgccaaataagcgaattgaaaatatgttccaagtgtgtgcaagtgat
gttacttatagcttgggtattttaaattttctgcaatattaccgttattattatgcagat
tttatgcaaaataaaacggtgatgattgtaagtgtaaaatggcaaaaagtggatattggt
atcgataatttatctcacaatttgcataaacaaggttggaatattgaatatgtagagctg
gaacaagagccgacggcttatcaacatttgatgaagcaaattcataatgtgtcgccctct
attatcgtacttgcttcttattttgcggaagatattgttcattttcatcaagcctttatt
gaaaatccgactaatgcaattatttacagtatttatgcgccttctgcatttttgccacac
gaacaaccttgcgaaggagtattgtggagtaccaatagcggcttaagcgataacttttta
ggacgccaattttgccagtgttatgagcagttattcgagcgaaaaccaacctattcacaa
gccagtattgcttatgatcaagtaaatattttagcgaatgcttggaaacaaagtgtttcc
cctcgccattttaaggcggtttcaaatattattcgtcagcaaccgcattatggtgtaaac
ggtacttattattttaataccgatagccaaatcggtttaacttatccagaaacaaaagac
ttatctattagcttgccacagcttatttaccaaatccagcaaggcagaagtgcggtaatt
gcaccagagttatttgcggattcgcaatttgtattacctacgtggttttcttataaataa
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