Mannheimia varigena USDA-ARS-USMARC-1388: X875_12020
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Entry
X875_12020 CDS
T03029
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mve03021
]
X875_12020
03009 Ribosome biogenesis [BR:
mve03009
]
X875_12020
Transcription machinery [BR:
mve03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
X875_12020
Ribosome biogenesis [BR:
mve03009
]
Prokaryotic type
rRNA transcription factors
X875_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
KH_2
KH_KhpA-B
S1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AHG79820
LinkDB
All DBs
Position
complement(1279292..1280788)
Genome browser
AA seq
498 aa
AA seq
DB search
MSKEILLAAEAVSNEKQLPKEAIFEALETALTIATKKSRDLDIDVRVVVDRKTGDFQTFR
RWAVVESVNNMTREISLEAAQFEDPNVQLGDFIEDEVESIEFGRVAIQTFGQVIKTKIRE
AEKSKIIDEFRSDLGKIIMATVKKVTRDNIFLELAGKTEDIKGEAVIVREDMIPRENFRP
GDRVRGVLYEIKPESKGPQLFVTRAKPVMLEELFKLEVPEIGEGVIEIKGSARDAGSRAK
IAVKTHDKRIDPVGACVGMRGARVQAISNELGGERVDIVLWDENPAQFVINAMAPADVSS
IVINDEAHSMDIAVESKNLAQAIGRNGQNVRLATQLTGWALNVMTNEELTQKNAEEDGKV
INLLTSALEIDEEFAQVLIEEGFTSLEAIAYVPVDALTAIDGLEDEDLVEELQSRAKNAI
TKKALEEEEALKSAHIEERLLMLEGIDRHIAFKLAEKQITTLEELAEQSVDDLADIEELS
EEKAGELIMAARQICWFN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagagattttattagctgcagaagcagtatcaaacgaaaagcaattaccaaaa
gaagcgatttttgaagcattggaaactgcgctaaccattgcaactaaaaaaagccgtgat
ttagacattgacgtgcgtgttgttgtagatcgcaaaacaggtgatttccaaacatttcgc
cgctgggcagtagttgaaagcgtaaataatatgacgcgtgaaatcagcttagaagctgct
cagtttgaagatccaaatgtacaattgggtgattttattgaagatgaagttgaatccatt
gaatttggccgtgtagcaattcaaacttttggtcaggtgatcaaaactaaaattcgtgaa
gcagaaaaatcaaaaattatcgatgaattccgttcagatttaggcaaaattattatggct
actgttaagaaagtaactcgtgataatattttccttgaattagcgggcaaaaccgaagat
atcaaaggtgaagcggtgatcgtgcgcgaagatatgattccgcgtgaaaacttccgccca
ggcgaccgtgtacgtggtgtgttatatgagatcaaacctgaatcaaaaggtcctcaactg
tttgttacccgtgcaaaaccagtgatgcttgaagagttatttaaacttgaagtgcctgaa
attggcgaaggggtgattgagatcaaaggctctgctcgtgatgcaggttctcgtgcgaaa
attgcagtgaaaacacacgacaagcgtattgacccagtaggtgcttgcgtgggtatgcgc
ggagctcgagttcaagcaattagtaatgagctcggtggcgagcgtgtcgatatcgtactt
tgggacgaaaacccagcacaatttgtgatcaacgcaatggctcctgcagatgtcagctca
attgtgatcaacgatgaggctcactcaatggacatcgctgttgagagcaaaaacttggcc
caagcgattggccgtaacggtcaaaacgtgcgtttagcgactcaactaactggttgggca
ttaaatgtgatgactaatgaagaattaacgcagaaaaatgcggaagaagacggtaaagta
atcaatttattaacctctgcgttggaaattgatgaagaatttgctcaagtattgattgaa
gaaggcttcacttcattagaggcgattgcttatgtaccagttgatgctttaacggcaatt
gatggcttagaagatgaagacttagttgaagagctacaatctcgtgcaaaaaatgcgatc
actaaaaaagccttagaggaagaagaggcattaaaatcggctcatattgaagagagatta
ttaatgcttgaagggatagatcgtcatatcgcattcaaattagcggaaaaacagattaca
actcttgaagaacttgcagaacaaagcgttgatgatttggctgatattgaagagctatca
gaagaaaaagcgggtgagttaattatggctgcacgtcaaatttgttggttcaactaa
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