Mannheimia varigena USDA-ARS-USMARC-1388: X875_12230
Help
Entry
X875_12230 CDS
T03029
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve00330
Arginine and proline metabolism
mve00480
Glutathione metabolism
mve01100
Metabolic pathways
mve01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
X875_12230
09106 Metabolism of other amino acids
00480 Glutathione metabolism
X875_12230
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
X875_12230
Enzymes [BR:
mve01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
X875_12230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AHG79841
LinkDB
All DBs
Position
complement(1308268..1310442)
Genome browser
AA seq
724 aa
AA seq
DB search
MELIMLHLKIAYSSLVQPYFHTTRELVAIDKTDFTDVGAIVLSTDDVHQYIDRILEKEFN
IPVFIVVEAGKILAPQYFDQVYHIQDLNNYDINLYSRQIETAVHLYEDKMLPPFFKMLSE
YVEMGNTAFDCPGHQGGQYFRKHPAGRFLYDFYGENIFRSDICNADVKLGDLLIHEGAAC
DAQKYAAQMFNADKTYFVLNGTSSANKVVTNALLSPGDLVLFDRNNHKSIHHGALIQAGA
TPIYLETARNPFGFIGGIDSHCFDDDYLKSLVKEIAPEKLNQQRPFRLAVIQLGTYDGTI
YNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMKECSPLLLELNEDDPGIIVTQSVHKQQ
AGFSQASQIHKKDKHIKGQSRYCNHKRFNNAFMLHASTSPFYPLFATLDVNAKIQGSSAG
RRLWLDCVKNGIEARKLVLNSCQLIKPFIPPYVNGKKWQDYSTDEIAQDLEFFKFHAGDS
WHKFEGYTENQYFVDPCKFMLTTPGIDIQTGEYEEFGIPATILANYLRENGIIPEKCDLN
SILFLLTPAETLTKMQTLVAQITSFEKHIKQNSLLKEVLPSVYANNAERYNGYTIRQLCQ
EMHGLYVARDVKTLQRNLFRKATLPPYVMNPKDANIELVRNNVELVPLTDIVGRVAAEGA
LPYPPGVICVVPGEKWNETAQKYFLALEEGINVLPGFAPEIQGVYLQKDPDGRTRAYGYV
LIEQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagttaattatgttacatttaaaaatcgcatatagttcattagttcaaccttatttc
catacaacaagagagttagttgctattgataaaactgattttacagatgttggtgctata
gtattaagtacggatgatgttcatcaatatattgatagaattttggaaaaagaattcaat
attccagtatttattgtggtggaggcagggaaaatcttagctcctcaatattttgatcag
gtttatcatatacaagatcttaataattacgatatcaatttatatagtcgccaaattgaa
acagcagtacatctttatgaagacaaaatgttaccaccgttcttcaaaatgttaagtgag
tatgttgaaatgggaaatactgcttttgattgcccagggcatcaaggtggacaatatttc
cgtaagcatccagcaggtcgatttctctatgatttctatggtgaaaatattttccgttcc
gacatctgtaatgctgatgtaaaacttggtgatttattaattcatgaaggtgctgcttgc
gatgcacaaaaatacgctgcacagatgtttaatgctgataaaacctactttgttttaaat
ggaacctcttctgctaataaagttgttactaatgcattactttctcctggtgatctcgtt
ttatttgaccgtaataatcataaatctattcaccatggtgcattaattcaagctggtgca
acaccaatttatcttgaaactgcccgtaatccatttggttttattgggggaattgatagt
cattgttttgatgatgactatctgaaatctttagtcaaagaaatcgctcctgagaaatta
aatcaacaacgcccatttcgtttagcagttattcagcttgggacatatgatggaactatc
tataacgcacgtcaagttgtcgataaaattggtcatctttgtgattatatcttatttgat
tcagcttgggtgggatatgaacaatttattccgatgatgaaagagtgctctcctttatta
ttagaattgaatgaggatgatcctggtattattgttactcaatccgtacataaacaacag
gctggtttttctcaagcatcacaaattcataaaaaagataagcatattaaaggccagtct
cgctattgtaaccacaagcgttttaataatgcttttatgctacatgcctcaactagccca
ttctatccgttatttgcaacattagatgtaaatgccaaaatccaaggtagctcagcagga
cgtcgattatggctagattgtgttaaaaatggtattgaagcccgcaagttagtacttaat
tcttgtcaattaattaagccatttattccaccatatgtaaatggtaagaaatggcaagat
tattctactgatgaaattgcacaagatcttgagttctttaaattccatgccggtgattct
tggcacaaatttgaaggctataccgaaaatcaatattttgttgacccatgcaaatttatg
ttaacaacaccaggaattgatattcaaactggtgaatatgaagaatttggtattccagcc
actattttggctaactatctacgtgaaaacggtattattccagaaaaatgtgatttgaac
tctatattattcttacttacccctgcagaaacccttacaaagatgcaaacacttgtagca
caaattacctcatttgaaaaacacattaaacaaaattcattgttgaaagaagtgttacca
agcgtttatgccaataatgctgagcgctataacggctacactatccgtcaactttgccaa
gaaatgcacggcctgtatgttgctcgtgatgtgaaaacattacaacgtaatctatttagg
aaagcgacattgccaccatatgtgatgaatcctaaagatgctaacattgaattggtacga
aataatgtagaacttgttccacttaccgacattgtaggtcgtgtcgccgcagaaggtgca
ttaccttaccctccaggtgtcatttgtgttgttccaggtgaaaaatggaatgaaactgcc
caaaaatactttttagcattggaagagggtattaacgtgttacccggttttgcaccagaa
attcagggagtttatttacagaaagatcctgatgggcgcacacgagcttatggttatgta
ttaattgaacaataa
DBGET
integrated database retrieval system
