Mannheimia varigena USDA-ARS-USMARC-1388: X875_12650
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Entry
X875_12650 CDS
T03029
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mve03400
]
X875_12650
DNA repair and recombination proteins [BR:
mve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
X875_12650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
RecA
SLFN-g3_helicase
GvpD_P-loop
AAA
ABC_tran
AAA_14
AAA_16
NTPase_1
AAA_24
Rad51
zinc_ribbon_6
nSTAND3
AAA_29
Viral_helicase1
DUF7125
PAXNEB
Zeta_toxin
AAA_30
DZR
zf-RING_10
cobW
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHG79883
LinkDB
All DBs
Position
1352094..1353473
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AA seq
459 aa
AA seq
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MAKAPKTAYVCNDCGAEYSRWMGQCKECKAWNTISEIRLISSKESAKSDRFSGYAGETSG
KVQTLSDISLQEVPRFSSGFNELDRVLGGGVVPGSAILIGGHPGAGKSTLLLQVMCGLAQ
HLPTLYVTGEESLQQVAMRANRLGLPTDNLKMLSETSVEHICNIADQEKPKIMVIDSIQV
MHLSDIQSSPGSVSQVRECASFLTRYAKTRQVAIIMVGHVTKDGTLAGPKVLEHAIDASL
LLEGESDSRFRTLRSQKNRFGAVNELGVFAMTELGLKEVKNPSAIFLSRSEEQTPGSSVM
VLWEGTRPLLVEIQALVDHSMLATPRRVAVGLDHNRLSLLLAVLHRHGGLQMSDQDVFVN
VVGGVKVTETSADLALILALISSFRNRPLPQDLVVFGEVGLAGEIRPVTSGQERISEAAK
HGFRRAIIPHGNAPKKAIKDMEVFTVKKLSDALDILGNL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaccaaaaaccgcctacgtttgtaatgattgcggtgcagaatattcccgt
tggatggggcaatgcaaagaatgtaaggcttggaatacgattagcgaaattcgcctgatt
tctagtaaagaatcggcaaaatctgaccgttttagcggctacgcaggtgaaacctccggc
aaagtgcaaacgctgtcggacatcagtttgcaggaagtgccacgttttagcagcggcttt
aatgagctggatcgtgtgctaggtggtggtgttgtgccgggttcagctattctgattggc
ggacaccccggtgctgggaaaagtacattattgctacaagtaatgtgcggattggctcaa
cacctgcctaccctttatgtgacgggggaagaatcgcttcaacaagtggcgatgcgggca
aaccgtttaggcttgccaaccgataatttgaaaatgctttctgaaacttctgtggagcat
atttgcaatattgcagaccaagaaaagccgaaaattatggtgattgactccattcaggta
atgcatttaagcgatattcaatcctcccccggaagcgtatcacaagtgcgtgaatgtgcc
tcattccttacacgctatgccaaaactcgccaagtggcgattattatggttgggcacgtc
accaaagacggtacactggcaggcccgaaagtgttggaacacgccattgatgcctcgctt
ctgcttgagggcgaatcggactcacgcttccgcactctccgcagccagaaaaaccgtttc
ggggcggtgaacgaacttggcgtatttgcaatgactgaactcggcttgaaagaggtaaaa
aacccctcggcaattttcctaagccgcagcgaagagcaaacgccgggcagctcggtaatg
gtactttgggaagggacacgtccgttattggtggaaattcaagcgttggtggatcactca
atgctagcgacccctcgccgtgtggcggtggggttagatcataaccgcttatcgctactg
cttgcggttttacaccgccacggagggttgcaaatgtcggatcaagatgtgttcgtgaat
gtagtcggtggcgtgaaagtaacggaaaccagtgccgatctcgccctgattttagccttg
atttcgagctttcgtaatcgcccattgccgcaagatttggtggtgtttggcgaggttgga
ttagcaggtgaaatccgccctgtcaccagcggacaagaacgtatcagcgaagccgctaaa
cacggctttaggcgagcgattattccacacggaaacgctcccaaaaaagcgattaaagat
atggaagtatttaccgtgaaaaaactcagcgatgcgttggatattcttggcaatctataa
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