Mannheimia varigena USDA-ARS-USMARC-1388: X875_12690
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Entry
X875_12690 CDS
T03029
Name
(GenBank) HTH-type transcriptional regulator QseD
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mve03000
]
X875_12690
Transcription factors [BR:
mve03000
]
Prokaryotic type
Helix-turn-helix
LysR family
X875_12690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AHG79887
LinkDB
All DBs
Position
1356225..1357112
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AA seq
295 aa
AA seq
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MKNIETKWLEDFLTLEECRHFSQAAAKRNLSQSAFSRRILALEEVVGVKLFDRTAIPLQL
TEQGKLFHSQTRNLLQQLRDNLDELLGHNCNLPNIKFAAAHSLSLSIMPKLIKQLSQTNE
NFIYSVEAIDVDQTVNTLIEGKSDFIFSFYDEKLMQPPFMSLEIMQSKLYPISPTDITGE
ALFNLKDQHIPLLNYTPNSYMGRLVNRKLAKTIELSTKTKFISSMSELLKNMLLNQQGIA
WLPEYAISEELQNKKVVILDNDELVIPIKGYIYRMNTRLNNAAERFWDNLQHIHL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatagaaacaaagtggttggaagattttttaaccttagaggaatgtcgccat
ttttcacaagcggcagcaaaacggaatttatcacaatctgcctttagcagacgaatctta
gcattagaagaagtcgtaggcgtgaagttgtttgatcgcaccgctattccgctacaactt
actgagcaaggaaaattatttcattcccaaacccgcaatttattacaacaattacgagat
aaccttgatgaattattggggcacaattgcaatttgccgaatattaaatttgccgctgca
cactcgctctctctttcaattatgccgaaattaattaaacagctctcacaaacaaatgaa
aactttatctattctgtcgaggcaattgatgtcgatcaaactgttaatacgcttattgaa
gggaaaagtgattttattttttcattttatgatgaaaaattaatgcaaccaccttttatg
tcgcttgaaattatgcagtctaaactttatccgatttctcctacagatattactggagaa
gccctgtttaacttaaaagatcaacatattccgttactaaactacacgccaaattcctat
atgggacgtttagttaatcgaaagttagctaaaactattgaattaagcaccaaaacaaaa
tttatttcctcaatgtctgaattactgaaaaatatgctactgaatcagcaaggcatcgct
tggttaccagaatatgcgattagcgaagaattacaaaataaaaaagtagtgatattagac
aatgatgaattggtcattccgattaaaggctatatttatcgaatgaatactcgcttaaat
aatgctgcagaaaggttttgggataatttacagcatattcacttatag
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