Mannheimia varigena USDA-ARS-USMARC-1388: X875_12970
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Entry
X875_12970 CDS
T03029
Name
(GenBank) Glycogen operon protein GlgX
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve00500
Starch and sucrose metabolism
mve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
X875_12970
Enzymes [BR:
mve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
X875_12970
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Motif
Pfam:
Alpha-amylase
CBM_48
GlgX_C
hDGE_amylase
pulA_all-beta
zf-C2H2_DHX34
Motif
Other DBs
NCBI-ProteinID:
AHG79915
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Position
complement(1387981..1389996)
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AA seq
671 aa
AA seq
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MQYQRGKPYPLGSKISLQAGKFGTNFAIFSENATAIELCLFDENNQETCIPMTASEHTWH
IFVEGIGAGVKYGFRVIGEQNEKAGLLFNKNKLLLDPYAKAITGTPDLSNVEAASWYAWN
DARDNGQIAPKSVVVDETFDWENDTLLFHTWAETIIYEMHVKGFSQLNPEIPQEIRGTFA
GLAHKNSIEYLKKLGITAVELLPITYHIDEPHLQKQGLVNYWGYNVLGNFAVDPKLAADK
QNPLKEFKQLVKTLHNANIEVIMDVVFNHTAEGSKDGAMLSFRGIDNRAYWLNGQGEYEN
WTGCGNTLNLTNINILRWAIDCLCYWVDECHIDGFRFDLASILGRTPRFSEKADFFTAIK
SHSKLASVKLIAEPWDIGMHGYQLGKFPAFFYQWNDRYRDDMRRFWLRKKLDLATFACRF
AGSDDVFLHSSGSKSINFITAHDGFNLQDLVSYNKKHNFANGEENRDGHGTNHSNNHGVE
GDTNKESVKNQREMTACSLLATLLLSNGVPMLFAGDEMGHIQQGNNNCYCQDNEITWLDW
ENCNQTRVDYVSDLISIRKQISLLSKQNKWWTEELVQWLNPSAEAMQINDWHNKELRQLT
ILLEGQWLILMNAYKQPKEFLLPQGNWQVVFGQEKGTLMTGTQAVTLNNMGVCVLQKSDA
IHTKILETQHA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcagagaggtaaaccttacccgttaggcagcaaaataagcctacaagcgggc
aaatttggcacaaattttgcaattttttccgaaaatgcgaccgctattgaattgtgcctt
tttgatgaaaataatcaagaaacttgtattccaatgactgcaagtgaacatacttggcat
atttttgttgaaggtattggggctggcgttaagtatggttttcgagtaataggtgagcaa
aacgaaaaagctggtttgttatttaataagaataaactgttactagatccttatgctaag
gcgattacaggcacacccgatttaagtaatgttgaggctgctagttggtatgcgtggaat
gatgctcgggataacggacaaattgcccccaaatcggtagtagttgatgaaacatttgat
tgggaaaatgatacgttactttttcatacttgggcagaaaccattatttatgaaatgcac
gttaaaggttttagtcagttaaatcctgaaatcccacaagaaattagaggaacttttgca
ggattagctcacaaaaactcgattgaatacttgaaaaagctcggcattaccgcagttgaa
ttattacctatcacttaccatattgacgaaccgcatttacaaaaacaaggcttagttaat
tactggggttacaatgttttaggcaattttgccgttgatccgaaattggctgcagataag
caaaatccgcttaaagagtttaagcaattagtgaagacattacacaatgccaatatagaa
gtgattatggacgttgtgtttaaccataccgcagaaggtagtaaagatggcgcgatgctt
agctttagagggattgataatcgcgcttattggctaaacggacagggtgaatatgaaaat
tggactggttgtggtaacacactcaatttaaccaatattaatattctccgttgggcaatc
gattgcttgtgttattgggtagacgaatgccatattgatggattccgttttgacttagcc
tctattttaggcagaacaccacgtttttccgaaaaagctgattttttcacggcaataaaa
agccactcgaaattagctagcgttaagctaattgctgagccttgggatattggaatgcat
ggctatcaattaggtaaattcccagcatttttttatcaatggaatgaccgctatcgtgat
gatatgcgtcgtttttggctaagaaagaaacttgatttagccacatttgcctgtcgattt
gcaggaagtgatgatgtttttctgcacagttctggctctaaaagcattaattttattact
gcccacgatggctttaatctgcaagatttagtgagttacaacaaaaaacataattttgcc
aatggcgaagagaaccgtgatggacatggcacgaaccacagtaataatcacggtgttgaa
ggagatactaataaggaatcagtaaaaaatcagcgagaaatgaccgcttgtagcttatta
gcaaccttacttctgtcaaatggtgtgccaatgttatttgctggtgatgaaatggggcat
atccaacaaggtaataataactgctactgccaagataacgaaatcacctggctagattgg
gaaaattgtaatcaaactagggtggattatgtgagcgatttaatctccatacgcaagcaa
atttcactgttatcgaagcaaaataagtggtggactgaagagttggttcaatggctaaat
ccatcagctgaagctatgcagataaatgattggcataataaagaattaagacaattaact
attttattagaagggcaatggctcattttaatgaatgcttataagcagcctaaagaattt
ttacttcctcagggcaactggcaagttgtttttgggcaggaaaaagggactttgatgaca
ggcacgcaagcagttacactcaataatatgggcgtatgcgtacttcaaaaaagtgatgca
attcacactaaaatattggagacacaacatgcttaa
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