Mannheimia varigena USDA-ARS-USMARC-1388: X875_14690
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Entry
X875_14690 CDS
T03029
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X875_14690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mve03400
]
X875_14690
Enzymes [BR:
mve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X875_14690
DNA repair and recombination proteins [BR:
mve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X875_14690
RecFOR pathway proteins
X875_14690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
WHD_RuvB
AAA
AAA_5
AAA_22
AAA_3
Rad17
Mg_chelatase
TIP49
AAA_14
AAA_2
nSTAND3
AAA_24
AAA_18
AAA_16
AAA_17
RNA_helicase
NTPase_1
Bac_DnaA
NB-ARC
GGDEF_2
AAA_28
ABC_tran
bpMoxR
Sigma54_activ_2
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AHG80087
LinkDB
All DBs
Position
1556820..1557824
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRIISASPKREEEVIDRAIRPKLLADYVGQPSVRDQMEIFIKAAKLRDEALDHLLI
FGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLTNLEPYDVLFIDEIHRLSP
AIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYSVDDLTLIVKRSADCLNLNLSADGAYEVARRSRGTPRIANRLLRRVRDYADVRNNG
IITSEIAKQALVMLDVDSEGFDFMDIKLLQAIVERFDGGPVGLDNLAAAIGEERDTIEDV
LEPYLIQQGFLQRTPRGRIATNRTYAHLGITKID
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatagaattattagtgcctcgccaaagcgtgaggaagaagtcatcgac
cgtgcaatccgccctaaattgcttgccgattatgttgggcaaccttccgtgcgtgatcag
atggagatcttcatcaaagccgccaaattgcgtgatgaggctctcgatcatttactgatt
tttggtcctcccggtttaggtaaaactacccttgctaatattgtggcaaatgaaatgggc
gtgaatatccgcacgacttccggcccagtattagaaaaagctggcgatttggctgcaatg
ctgactaaccttgagccttatgatgtgcttttcattgatgaaattcaccgcctctctccc
gctattgaagaagtgctttaccccgcaatggaagattatcagctcgatattatgattgga
gaaggtcctgctgcccgctcaattaaacttgatctccccccctttaccttagtgggggca
actactcgagcgggctcactgacctcaccattacgagatcgttttggcattgtacaacga
ttagaattttattcagtggatgatctcacgttaattgtaaaacgcagtgcagattgctta
aatctgaatttatctgcagacggtgcttatgaagtggctcgccgctcacgtggtacacct
cgtattgctaaccgcctacttcgccgtgtgcgagattatgctgatgttcgcaataacggt
atcattacttcagaaattgctaagcaggctttagtaatgcttgatgtagattctgagggc
tttgattttatggacatcaaactactccaagcaattgtagagcgttttgacggtggtcct
gttggtttagataaccttgcagcagcgattggcgaagagcgagacacgattgaagatgtg
ttagagccttacttaattcaacaaggttttttacaacgtactcctagggggcgaattgcc
actaatagaacctacgcacatttaggcatcaccaaaattgattaa
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