Mannheimia varigena USDA-ARS-USMARC-1388: X875_15390
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Entry
X875_15390 CDS
T03029
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve00260
Glycine, serine and threonine metabolism
mve00460
Cyanoamino acid metabolism
mve00630
Glyoxylate and dicarboxylate metabolism
mve00670
One carbon pool by folate
mve00680
Methane metabolism
mve01100
Metabolic pathways
mve01110
Biosynthesis of secondary metabolites
mve01120
Microbial metabolism in diverse environments
mve01200
Carbon metabolism
mve01230
Biosynthesis of amino acids
mve01240
Biosynthesis of cofactors
mve04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
X875_15390
09102 Energy metabolism
00680 Methane metabolism
X875_15390
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
X875_15390
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
X875_15390
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
X875_15390
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
X875_15390
Enzymes [BR:
mve01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
X875_15390
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
Phage_capsid
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AHG80157
LinkDB
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Position
complement(1627815..1629077)
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AA seq
420 aa
AA seq
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MLKRDMNIADYDAVLWQAIQDEDRRQEEHIELIASENYASPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANAAVYMALLNPGDTILGMS
LAHGGHLTHGASVSFSGKIYKAEQYGITAEGLIDYDALRKQAQEVKPKMIVAGFSAYSQV
IDWAKVREIADEVGAYLFVDMAHVAGLIAAGVYPNPLPHAHVVTTTTHKTLAGPRGGLIL
SACGDEEIYKKLQSAVFPAGQGGPLMHVIAAKAVCFKEALEPEFKAYQQQVVKNAKAMVE
VFKQRGFEVVSNGTENHLFLVSFVKQGLTGKAADAALGAANITVNKNSVPNDPQKPFVTS
GIRVGTPSVTRRGFKEADVTALAGWMCDVLESIGKDNHEQVIAETKAKVLDICKRLPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacgtgatatgaatatcgcagattatgatgctgttttatggcaggctatccaa
gatgaagatcgtcgccaagaagaacatattgagttaattgcatcagaaaattatgcaagc
ccacgtgtaatgcaagctcaaggttcacaattgacaaataaatatgctgagggatatcca
ggtaaacgttattatggcggttgtgagtatgtggatattgttgaacaattagctattgat
cgtgctaaagagctatttggtgctgattatgctaatgtgcagccgcattctggctcgcaa
gcaaatgccgcagtatatatggcgttattaaatccgggcgatacgattttaggaatgagt
ttggctcacggtgggcatttaacacacggtgcttcagtcagtttttctggcaaaatctat
aaagcggagcaatatggtattaccgcagaaggcttaattgattacgatgcattgcgtaag
caagctcaagaagttaagccaaaaatgattgtggctggtttctctgcttattctcaagtg
attgattgggcaaaagtgcgtgaaattgctgatgaagtaggagcttacttatttgtggat
atggcacacgttgcaggtttaatcgcagctggagtttacccaaatccacttccacacgca
cacgttgttacaactacaacacataaaacattagccggtcctcgcggtggtttaatttta
tctgcttgtggcgatgaagaaatctataaaaaactacagtctgcggtattcccagcaggt
caaggtggtccgttaatgcacgttattgcagcaaaagcggtttgctttaaagaagcatta
gagcctgaatttaaagcctaccaacaacaagtggtaaaaaatgcaaaagcaatggtggaa
gtatttaaacaacgtggctttgaagttgtttctaacggaacggaaaatcatttattccta
gtaagttttgtaaaacaaggcttaactggtaaagcggcagatgcagctttaggtgcagca
aatatcacggtaaataaaaactcagtaccaaacgatccacaaaaaccatttgtaacatca
ggtatccgtgtaggtacaccatctgttacccgtcgtggctttaaagaagcagacgtaacc
gcactagccggttggatgtgtgatgtattggaaagtatcggtaaagacaatcacgaacaa
gtgattgcagagacgaaagcgaaagtattagatatctgtaaacgtttaccagtttacgca
taa
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