Mannheimia varigena USDA-ARS-USMARC-1388: X875_15630
Help
Entry
X875_15630 CDS
T03029
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mve03009
]
X875_15630
Enzymes [BR:
mve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
X875_15630
Ribosome biogenesis [BR:
mve03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X875_15630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHG80181
LinkDB
All DBs
Position
complement(1653234..1654313)
Genome browser
AA seq
359 aa
AA seq
DB search
MTTFQKKPTHNARSDKRGDSRPSFKKEDQKSERKFGKSTEKPQRPTSKPLAAKVAKKVVK
TTASDAAKGAENQEKKAKVVGEKLQKILARAGQGSRRELEEIIAAGRVSVDGKIATLGDR
VQVSSSTKIRIDGHLINLISTQKEICRVLMYYKPEGELCTRSDPEGRATVFDRLPRLTGS
RWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVRVFGNIDDAMLQRLRKGVQ
LEDGPANFKQIKVVGGTGLNQWFDVTLTEGRNREVRRLWESQGVEVSRLIRIRYGNIKLD
KGLPRGGWEEMGLEQVNYLRELVSLPAETETKVDVTANRRRTNIRQIRKAVKQHQKYRG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttttcaaaagaaaccaacccacaacgctcgctcggacaaacgtggcgatagc
cgtccttctttcaaaaaagaagatcaaaaatcagaacgtaaattcggcaaaagcacggaa
aaaccgcagcgaccaacctcgaaacctttagccgccaaagttgcaaaaaaagtcgtaaaa
acgaccgctagtgacgctgcaaaaggggcggaaaaccaagagaaaaaagccaaagtggtg
ggtgaaaaactgcaaaaaatcttggctcgtgcagggcaaggctctcgccgtgaattagaa
gagatcattgccgcagggcgtgtgagcgtagacggcaaaattgctaccttgggtgaccgt
gtacaagtgagttcttccaccaaaattcgtattgacggacatttgatcaacttaatttct
acccagaaagagatctgtcgtgtgttgatgtattacaaaccggaaggcgaactttgcact
cgttcagaccctgagggcagagcaaccgtatttgaccgcttgcctcgcttaaccggttca
cgctggattgcggtagggcgtttggatatcaacacctcgggcttattgctgttcacgaca
gacggcgagctggcaaaccgcttaatgcacccgagccgtgaggtggagcgtgaatattcg
gtgcgtgtgttcggcaatattgatgatgcaatgttgcaacgtttacgcaaaggtgtgcag
ttggaagacggtccggcaaacttcaagcaaattaaagtcgtgggcggaacaggcttaaac
caatggtttgatgtgaccttaactgaagggcgtaaccgtgaagttcgccgtttgtgggaa
tctcaaggggtggaagtgagccgcttaattcgtattcgctacggcaatatcaagctcgac
aaaggcctgcctcgtggcggttgggaagagatggggcttgagcaagtaaactacttgcgt
gagttggtcagcttaccagcagaaacggaaaccaaagtggacgttacggcaaaccgacgc
cgaacaaacattcgtcagatcagaaaagcggtaaaacaacatcaaaaatatcgtggttag
DBGET
integrated database retrieval system
