Mannheimia varigena USDA-ARS-USMARC-1388: X875_1620
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Entry
X875_1620 CDS
T03029
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mve03009
]
X875_1620
Enzymes [BR:
mve01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
X875_1620
Ribosome biogenesis [BR:
mve03009
]
Prokaryotic type
ribosomal protein modification factors
X875_1620
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
YajR_YAM
Methyltransf_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AHG78784
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Position
complement(162474..163811)
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AA seq
445 aa
AA seq
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MSATPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYEDADLVIVNTCGFIDSAVQES
LESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVMNHVHKYVPKPEFN
PYTSLVPKQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLASRPIVQVLDEAKRLVD
AGVKELLIVSQDTSAYSLDRKKEETTKTVFWNGMPIKSNLITLCEQLGSMGVWVRLHYVY
PYPHVDDLIPLMAAGKILPYLDIPLQHASPKILKAMKRPGSIERTLERIKKWREICPELT
LRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGCFKFSPVEGAVATDMPDQVPEEVKEER
FHRFMQLQQQISAERLQAKIGKTLPVIIDEIDEEGIIGRSMADAPEIDGVVYVDNLENKD
VSVGQIISVTITHADEYDLWGSLTN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaccccgaatattggttttatcagcttaggctgcccaaaaaatttagttgat
tccgaacgtattttaactgaactacgggcagatggttataatattatcccaagttatgaa
gacgctgacttagtgattgtaaacacctgcggttttattgattccgcagtgcaagaatca
ttagaaagcattggcgaggcgttggaagcaaacggtaaagtgatcgttacaggctgttta
ggagcaaaagaaaaccaaattcgtgaagttcacccgaaagtattggaaattacaggtccg
catagttatgaagcggtgatgaaccacgttcacaaatatgtgccgaaacctgagttcaat
ccttacactagccttgtaccaaaacaaggcgtaaaactcacaccaaagcattacgcttac
ttaaaaatttcagaaggctgtgatcatcgttgtacattctgcattattccatcaatgcgt
ggagatttggcaagccgcccgattgtgcaagtgctagacgaagcaaaacgcttggtagat
gcaggtgtaaaagagttattaattgtctctcaagacacctctgcttactcattagatcgc
aaaaaagaagaaactactaaaaccgttttctggaacggtatgccgattaaaagtaaccta
atcacactttgtgaacaattaggctcaatgggcgtttgggtgcgtttgcattatgtgtat
ccatatccgcacgtggacgatttaattccactgatggcggcaggcaaaattctgccgtat
ttggacattccgctccagcacgccagcccgaaaatcttaaaagcgatgaaacgcccgggc
tccattgaaagaacccttgagcgtattaaaaaatggcgtgaaatctgccctgaattaacg
ctacgttccacttttattgtcggtttcccgggagaaacagaggaagatttccaactatta
ctcgatttcttaaaagaagcccaacttgaccgtgttggctgctttaaattcagcccggtg
gaaggtgcagttgcaaccgatatgccggatcaagtgccggaagaggtaaaagaagaacgc
ttccaccgctttatgcagttacagcaacaaatttcagccgagcgtttacaggctaaaatc
ggtaaaaccttacctgtaatcattgatgaaattgacgaagaaggtattattgggcgttca
atggctgatgcacctgagattgatggtgtggtttatgtggataaccttgaaaataaagac
gtttctgtaggacaaattatttcagtaaccattacacatgcagatgagtacgatctgtgg
ggtagcttaacaaattaa
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