Mannheimia varigena USDA-ARS-USMARC-1388: X875_16800
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Entry
X875_16800 CDS
T03029
Name
(GenBank) LapA secretion ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X875_16800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mve02000
]
X875_16800
02044 Secretion system [BR:
mve02044
]
X875_16800
Transporters [BR:
mve02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
X875_16800
Secretion system [BR:
mve02044
]
Type I secretion system
Adhesin protein transporter
X875_16800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
AAA_13
AAA_29
Cpta_toxin
Motif
Other DBs
NCBI-ProteinID:
AHG80296
LinkDB
All DBs
Position
complement(1770766..1772958)
Genome browser
AA seq
730 aa
AA seq
DB search
MKSIIEHISLVTQIYGNPIAQEALTAQVVRDVNNKVNFYSVIEVLRSYGFENSISQRPLQ
EIPSLSVPVVAILQNEEAVVITKIKGKGLERRYHIRQSSDSEQIIDHKTLAQNYLGYCWF
IKPKIVSDVRSELPEYDMPKAWFWKVIWRFRGYYYQIVLASFIINFLALVSSLYVMNVYD
RVIPNQTYETLWALSIGVIIAIFFEFVGRMIRGHLTDVAGKKADLIISSALFRRVMALRL
IDKPASSGSYANNLREFESVREFMTSASLLALVDLPFLFLFLFVIYLVGGILAAVPLVMI
SIVLIISFVVQPKLSARLNESMRESSQRQGLIVEALDGIETLKANNAINWAQQRWDMYTA
KVSAAQIKVKDLSNFVTNFATKVQQLNTVFLVILGAYMVHAEAEVERITIGAIIASVILS
GRALAPVTQIASLAVRFQQAKLALKGLDAIVERPIERDSSRQYITLKQVYGKVEFRNVSF
QYNQDSPEALDGLNITIRAGEKVGILGKIGSGKSTMLKLASGLYEPMKGGVALDDVDIRQ
LDPNYLRSQVALLTQSERLFLGSLRENLDMARTDNLADDRVLVQALQRFGLLPLVQRHPK
GLDMPLGENGLGLSGGQKQLVALARMTIKDPKIVLLDEPTSDLDQGSEDMVLNSLAQWIG
SRTLMVVTHRPQVLKLVSRVIVMDNGKVVMDGPRDEILARLRNQNRPQADEETAQAHTVT
AEKVNKTEVK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaattattgaacatatttcactagttacccaaatttatggtaatccaattgca
caagaagcgttaactgctcaagttgtgcgtgatgtaaataataaagtgaatttctattct
gtgattgaggtgttacgtagttatggctttgaaaactcgatctcgcaacgcccattacag
gaaattccaagtttatctgtgcctgtggtcgctattcttcaaaatgaagaagcggtagtt
attaccaaaattaaggggaaaggtttagagagacgctaccatattcgtcaatcaagtgat
agtgaacagattatcgaccataaaactttagctcagaactatttaggctattgctggttc
attaagccgaaaatagtgtcggatgtacgttctgaattgcctgaatatgatatgccaaaa
gcatggttctggaaagtgatttggcgtttccgtggatattactatcaaattgtgctagcg
agttttattatcaactttttagccttggtaagttcgctttatgtaatgaatgtgtatgac
cgtgtaattccaaaccaaacttatgaaaccttatgggcgttgagcataggggtgattatt
gcgatattctttgagtttgtagggcgtatgattcggggacatttaaccgatgtagctggt
aaaaaagcagatttaattattagttcagccttgtttaggcgggtgatggcattgcgttta
attgataagccagcatcatcgggttcttatgcaaataatctgcgtgaatttgagtcagtt
cgtgaatttatgacaagtgcgagcttgctggcattagtggatctcccattcttattcttg
tttttattcgttatatatttagtaggtggcattttagctgctgtgccattagtgatgatt
agtatcgtgcttataataagctttgtggtacaaccaaaattatctgctcgtttaaacgag
tcgatgcgtgagtcttcacaacgtcaaggcttgattgtagaggcattagatggcattgaa
acattaaaagccaataatgccataaactgggcacaacaacgctgggatatgtacacggca
aaagtatctgcagcacaaattaaagtgaaagatttaagtaactttgtaactaactttgcc
acaaaggtacagcaattaaatacggtatttttggttatcctgggtgcttatatggtgcat
gcagaagctgaagtagagcgtattactattggtgcaattattgcatcggtgattttatca
ggtcgtgcattagcgcctgttacgcagattgcttcgttagcggtacgtttccaacaagct
aaattagctttaaaaggtcttgatgcaattgttgaacgccctattgagcgcgattcatct
cgtcagtacattacccttaagcaagtgtatggtaaagtagagttccgtaatgtgtctttc
caatataaccaagattcaccagaagctctggatggtttgaatataactattagagctgga
gagaaggtcgggatcttgggtaaaatcggtagtggtaagagtacaatgctcaaattagct
tctggcttatatgaaccaatgaaaggtggtgtagccctagatgatgtggatattcgtcag
cttgatccaaattatttgcgtagccaagttgctttattgactcagtctgaacgcctattt
ttggggtcgttgcgtgaaaacttagatatggcaagaacggataacttagcagatgaccga
gttttagtgcaagcattgcaacgttttggtttattaccattagttcaacgtcatcctaaa
ggtttagatatgccattaggcgagaatggtttaggtctatctggcggtcaaaagcagtta
gttgctcttgctcgaatgactattaaagatccaaaaatagtattattagatgaaccaacg
agcgatttagaccaaggttcggaagatatggtactaaattcattagcacagtggatagga
agtagaacgcttatggtagtgacacatcgtcctcaagtactaaagttagtgagccgtgta
attgtaatggataatggtaaggttgtaatggatggtcctcgtgatgagatattggctcgt
ttaagaaatcaaaatagaccgcaagccgatgaagaaactgcacaagctcatactgtgacg
gcggagaaagtaaataagacagaggtaaaataa
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