Mannheimia varigena USDA-ARS-USMARC-1388: X875_1730
Help
Entry
X875_1730 CDS
T03029
Name
(GenBank) hypothetical protein
KO
K01406
serralysin [EC:
3.4.24.40
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
X875_1730
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mve01002
]
X875_1730
Enzymes [BR:
mve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.40 serralysin
X875_1730
Peptidases and inhibitors [BR:
mve01002
]
Metallo peptidases
Family M10
X875_1730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
PCC_BT
DUF4573
CAP_C
Motif
Other DBs
NCBI-ProteinID:
AHG78795
LinkDB
All DBs
Position
177641..182572
Genome browser
AA seq
1643 aa
AA seq
DB search
MQLSRGNTKYIQAEESTQYQIFNEQGELVLNPKVEKVNKDDLAIYVEGETQPSLILEDYY
DTYPIEDRAYLAEHSASLATSSREAVLATEVTSGVSSKVVYGLGAATLIGGLFALGGGSG
GAKSSKPNDPTTPEEPTTPVQPTTPVQPTTSVQPTTPVQPTTPVQPTTPVQPTTPVQPTT
PVQPTTPVQPTTPVQPTTPVQPTTPVQPTTPVQPTTPVQPTTPVQPATPVQPTTPVQPTT
PTEPKPVDKEITHPIITLNDVTADNIINISESGEVIKVSGKVANVTNSEAKSGDKVTVQI
GNEKFETTLKADLSFEVNASGQLLATNSKVTVTVETSDAAGNTLSTLEEKVYTVDSVLEN
PIITLKDVTIDNIVNIAESNEAAIKVGGTVENVANSNAKVGDKVTVQIGNEKFETTLKAD
LSFEVNASGQLLEANSTVTVTVETSDAAGNSLSTVESHDYQVDTDIAEPNLVINGIATDD
IINAVEMRTDTIIVTGYAINGPFAEAKEGDKVFLKVGDLSVDGLLDAQLKFSIPVSTIAL
VNHKLVTATLITNDSVQNSVTTTVNRSVDVDTDFDLSVSVNQITVDNVVNRAESEQNVTL
SGTYTADNDVKAGSVVISVLINGQTHAATVNESDKTWTLSVAGTDLVPTQGERSVTATIT
AQDNAGNEGTASQAHQYRVDTVIDKPVVTITSIAGDDVIDATEARGTIKITGIVENYEGS
NSVVLLCPCQSCASGWKEVEATVVDGKFEVDVLVSETSLANAKLKSGERIVKAKYTAKDT
AGNEAAADEASRKYEIELNNPEIDITKIDENFSLDMNGSTRVNVAIQQFGVVENQMDADL
YNQGKNARFIRTAKLVIGDKTYQGGFNGVTKTFSVDIPNADLAAIAGQNVRVDFTDMITN
HPNPYSFYAFSTTPYLEGTTTYLTPRRTPTAKKFTLESDVLVQNGENSYTVKSFATEQTE
ISGTVKGDVAVGADIEVKVGTHTVMTKVKDDKTFSVLVDTVHLKNNASSAVTATVKNTGN
DVVTDKEWYVQPKEVSAKFVSQHKEVLAADRRIDHTKDDYNFFYPIHYLDGGARKEQFLK
YVEVGGTETPFTVKYHFLRTDEVSQIPTNSQGLEAIGANTAQEIPDALKAAFRFAYNQIA
KYTNIKFEEVGTWQEVDGDKGTLLFVGDLQAKNYKGSAAIAYQGGNLVWDPVIGGLGNPG
DYSHYLAMHEILHTLNLAHAHNTISGGYANNPPEATASNHVAEAAAEFSNMSYWTSTSFT
GMRDLRMYDLAYLHYRFGVNREHRAGNDVYTFKNYDARKADGDIYIWDGNGVDTFDASME
KEGVTVNLTPGSWNYRGEERKFNFVTDGRSVFNKNQYFDVPETTTMRGSALNNAHNAVRF
NPVAAGVIEFNNYHEGQSFIGYGTQIENLIGSKFGDKLTGNNADNNIFGGAGDDTIISGL
GDDFINGGEGNDLMFGNAGSDTYVIDAVGDVVTEEAGEGDADHVYSFISYELGDDATSHI
ENLTLVGTTATEATGNALNNMIRGNDLGNTLKGLDGNDILIGGLGKDILIGGSGNDTFVF
DSALNGKVDTIVDFTVGEDKIQLSPDIFSSLAVGLSNLNDHLFYDQETGELSYNSDTTGV
ANSVNFAVVSGLQSLEAEKFILA
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttagccgtggtaatacgaaatacattcaagcagaagagagtacccaataccaa
attttcaatgagcagggtgagctagtacttaacccaaaagtagaaaaagtaaataaagat
gatttagccatttatgttgaaggtgaaactcagccatcattaattttagaagattattac
gacacttacccgattgaggacagggcttacttagcagagcattctgccagtttggcgact
tcaagccgtgaggctgtgcttgcaacagaagttacatcaggcgtatcctctaaagttgtt
tatggtttaggtgctgctaccttgattggtggtttatttgctttaggtggcggtagtggt
ggtgctaaatcgtcaaaaccgaacgatccaactacacctgaagaaccgacaacgccagtt
cagccgacaacgccagttcagccgacaacgtcagttcagccgacaacaccggttcagccg
acaacgccagttcagccgacaacaccggttcagccgacaacgccagttcagccgacaacg
ccagttcagccgacaacaccggttcagccgacaacaccggttcagccgacaacaccggtt
cagccgacaacaccggttcagccgacaacaccggttcagccgacaacaccggttcagccg
acaacaccggttcagccggcaacgccagttcagccgacaacgccagttcagccgacaacg
cctactgagccaaagcctgtagataaagagattactcatccaattatcactttgaatgat
gttacagcggacaatatcattaatatctcagaaagtggtgaagtgataaaagtaagtgga
aaggtggcaaatgttaccaattcagaagccaaatcaggcgataaagtgaccgttcaaatt
ggtaacgagaaatttgaaactacgctgaaagctgatttaagttttgaagtcaatgcaagc
ggtcaattattagcaacaaatagcaaagtgacagtaacggtagaaacttctgatgctgca
ggcaatacgcttagtacactggaggaaaaagtctacactgttgatagtgtgttagagaac
ccaatcatcacattgaaagatgtgacaatcgacaatatcgtcaacattgccgaaagcaac
gaggcagcaatcaaggttggcggaacagtcgaaaatgtagcaaattcaaatgctaaagtt
ggcgataaagtgaccgttcaaattggtaatgagaaatttgaaactacgttgaaagctgat
ttaagttttgaggtcaatgcaagcggtcagttattggaagcaaatagcacagtgacggta
acggtagaaacttctgatgctgcaggtaatagtctaagtacggtagaaagccatgattac
caagtagatactgatattgcagagccaaaccttgtgattaatggaattgcgactgacgat
atcatcaatgcggttgagatgcgtaccgacacgattatagttactggttatgcaataaac
ggtccgttcgctgaagcaaaagaaggcgacaaggtgttcctcaaagtaggtgatttgagc
gtagatgggctgttagatgcacagcttaaatttagtattcctgtcagcactattgcttta
gtcaatcataaattagttactgcgactttaattacaaacgactctgtacaaaatagtgtt
actactacagtaaatcgttctgttgatgtggatactgattttgatttatcggtaagtgtg
aaccaaattactgtggataacgtggtaaatcgtgctgaatctgagcaaaatgttaccttg
tcaggcacttataccgcagataatgatgtgaaagccggctcggtggtgatcagcgtattg
attaatggtcaaacacacgcggcaaccgtgaacgaatcggataaaacttggacgctgtcg
gtggcaggcacagatctggtgccgacacagggcgagcgttcggtgactgcaaccattacc
gcacaagataatgcgggcaatgaaggcaccgcgagccaagcacatcaataccgtgttgat
acggtgattgataaaccagttgtgaccattaccagcatcgctggcgatgatgtgattgat
gcaacagaagctaggggtacgattaagattaccggtatcgtagaaaactacgaaggcagt
aattctgttgtcctactttgcccgtgccaatcttgtgcaagtggctggaaagaagtggaa
gcgacggtagtggatggcaagtttgaagtggatgtgttggtgagtgaaaccagtctcgcc
aatgcaaaactcaaatccggcgagcgtatcgtgaaagccaaatataccgctaaagatacc
gcaggcaacgaagcggcagccgatgaagcgagccgtaaatatgagattgagctgaacaat
cctgaaatcgacatcacaaaaattgatgagaatttcagcttggatatgaacggcagtacc
cgtgtgaatgtggcgattcagcaatttggtgtggttgagaaccaaatggatgccgacctt
tacaaccaaggtaaaaacgcccgctttatccgtaccgcaaaattggtgattggcgataag
acctaccaaggcggctttaatggcgtgaccaaaaccttcagcgtagatattccaaatgcg
gatttggcggcgattgcaggtcaaaatgtaagggttgattttaccgatatgattaccaac
catccgaatccgtattcgttctatgcgtttagtacaacgccgtatttggaaggtacgact
acatacttaacgccaagacgcacgccaacggcgaagaaattcacgctcgaaagtgatgta
ttggtgcaaaatggcgagaacagctataccgtgaaatcatttgccaccgagcagactgaa
atcagcggtacggtaaaaggtgatgtggcagtcggtgcggacattgaagtgaaagtcggt
acgcatacggtgatgacaaaagtcaaagacgataagacatttagtgtcttggtggatacc
gttcacttgaaaaacaatgcgtcaagtgcagtcaccgctactgtgaagaacacgggtaac
gatgtggtaacggataaagagtggtatgtgcagccaaaagaagtgtcggcgaagttcgtc
tcgcagcataaagaagtgttggcagcagaccgtcgaatcgaccataccaaagacgactat
aacttcttctatccgattcattacctagatggcggcgcaagaaaagagcagttcttgaag
tatgttgaagtgggcggaacggaaacgccatttaccgtgaaatatcacttcttgcgtacc
gatgaagtaagccaaattccgaccaattcacaaggtttggaagcgattggggcgaatacg
gcacaagagattcctgatgcgttaaaagcggctttccgttttgcgtataatcagattgct
aaatataccaacatcaaatttgaagaagtcggtacttggcaggaagtggatggcgataaa
ggtacacttctctttgtcggcgatttacaggcgaagaactataaaggttcagcagcgatt
gcctaccaaggcggtaacttggtgtgggatccggtgattggtggtttaggtaatccgggg
gattactctcattacttagcaatgcacgaaattctgcacacgctgaacttggcacacgcc
cataacaccattagtggcggttatgcaaacaatccaccggaagcgactgcatcgaaccat
gtggctgaagcagcggcagagttctcgaatatgtcttactggacttcgacatcgttcacg
ggtatgcgtgatttaagaatgtatgacttagcatatctgcactaccgcttcggggtaaac
cgtgagcatcgtgcgggcaatgatgtctatactttcaaaaactatgatgctcgtaaagca
gatggcgacatctatatttgggatggtaacggcgttgatacctttgacgcttctatggaa
aaagagggcgttaccgtgaacttaaccccgggttcgtggaactatcgtggagaagagcgt
aaatttaactttgtgaccgatggcagaagtgtgtttaataaaaaccaatacttcgatgtg
ccagagacgactacaatgagaggctcggcgttaaataatgctcataatgctgtccgcttt
aatcctgttgcagctggtgtgattgagtttaacaactaccatgaagggcagtcgttcatc
ggttatggtacacagattgagaacctgattggttcgaaatttggcgataagctgactggt
aacaacgcggataacaacatcttcggcggtgctggtgatgatacgattatcagcggtttg
ggcgatgactttatcaatggcggtgaaggcaatgacctaatgttcggtaatgcaggcagt
gacacctatgtcatcgatgctgtcggtgatgtcgtgaccgaagaagcaggcgagggtgat
gctgaccatgtttatagctttattagctatgagcttggtgatgatgcaacatctcatatt
gaaaatttgacacttgttggaacaactgcaactgaggcaacaggtaatgcactcaataac
atgattcgaggaaatgatcttggcaataccttaaaaggcctagatggtaacgacatcttg
attggtggcttaggaaaagatattcttattggtggcagtggtaatgatactttcgtgttc
gatagtgctttaaacggcaaagttgatactattgtggattttactgtaggtgaagataaa
atccaactttctccagatatcttctcttctcttgctgtaggtttatctaacttaaatgac
catttattctatgatcaagaaacaggtgagttaagctataacagcgatacaaccggcgtt
gcaaattcggtgaattttgcagtagtatcaggtttacaaagtcttgaagcagagaagttt
atcttagcttaa
DBGET
integrated database retrieval system
