Mannheimia varigena USDA-ARS-USMARC-1388: X875_17910
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Entry
X875_17910 CDS
T03029
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
X875_17910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mve03021
]
X875_17910
03400 DNA repair and recombination proteins [BR:
mve03400
]
X875_17910
Enzymes [BR:
mve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
X875_17910
Transcription machinery [BR:
mve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
X875_17910
DNA repair and recombination proteins [BR:
mve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
X875_17910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AHG80405
LinkDB
All DBs
Position
complement(1893444..1893725)
Genome browser
AA seq
93 aa
AA seq
DB search
MARVTVQEAAEKIGNRFDLILIAARRARQLQLHTREPLVPEENDKPTVIALREIEEGLIT
TDIMDQLENHESIKQEAAEQEAISFLTEMSNEA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtgtaaccgtacaagaagcagcggagaaaattggcaaccgttttgatttaatc
ttaattgctgcacgtcgtgcaagacaattacaacttcacacgcgtgagccacttgtgcct
gaagaaaatgataagccaactgttatcgcattgcgtgaaattgaagaaggcttaattacc
actgatattatggatcagttagaaaatcacgagtctattaagcaagaagcggcagagcaa
gaagcaatttcgtttttaactgaaatgagcaacgaagcgtaa
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integrated database retrieval system
