Mannheimia varigena USDA-ARS-USMARC-1388: X875_19820
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Entry
X875_19820 CDS
T03029
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
X875_19820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mve03400
]
X875_19820
Enzymes [BR:
mve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
X875_19820
DNA repair and recombination proteins [BR:
mve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
X875_19820
Prokaryotic type
X875_19820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHG80596
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All DBs
Position
2101133..2102275
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AA seq
380 aa
AA seq
DB search
MNSNSSQYPLATAKVSAPFAKSVLAWFEQYGRKHLPWQQNKTLYKVWLSEVMLQQTQVAT
VIPYFARFTERFPTVTDLANSSIDEVLHLWTGLGYYARARNLHKAAQQIRDEFDGEFPTT
FDDVLALSGVGRSTAGAILSSVLDAPHPILDGNVKRVLSRYFAVEGWAGEKAVENQLWQL
SESVTPTERVADFNQAMMDLGAMICTRSKPKCLLCPLQEHCQTNAMQAWDKFPAKKPKKM
LPERQAYFLILKNGSKVLLQKREAKGIWGGLFSFPQFESLGALKRSDLVKNLQISQQLTT
FRHTFSHFHLDITPILVDLNVQKKDKILPLVAEENAGNYLSTVSSEADYWYDFSQHNEIG
LATPVKRILDELAFSVTNDN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaattcttcacaatatccgttagcaacggcaaaagtatctgccccatttgca
aaatctgtattagcgtggtttgagcaatacgggcgtaagcatttgccttggcagcaaaat
aaaaccttatacaaggtttggttgtctgaggtaatgttgcaacaaactcaagttgccact
gttattccttattttgcacgttttacggaacgatttccaaccgttactgacttagctaat
agctcgattgatgaagtcttacatttatggacgggcttaggctattacgcaagggcaagg
aacctccataaagcagcacaacaaattcgagatgaatttgatggcgagtttcccacaaca
tttgatgatgtactggcattgtccggggttgggagaagtacagcgggggcgattttgtct
tcggtgttagatgctccgcacccgattttagacggtaacgttaaacgtgtgttaagccgc
tattttgcggtggaaggctgggctggcgaaaaagcggtggaaaatcaactttggcagtta
agcgaaagtgttacaccaacggaacgagtagctgattttaaccaagcaatgatggattta
ggggcgatgatttgtactcgctctaagcctaaatgcctgctctgcccgttacaagaacat
tgccaaacaaatgcaatgcaagcgtgggataaattccccgctaagaagccaaagaaaatg
ctccccgaacgccaagcctattttttaattctaaagaatggctcaaaagtgttattacaa
aaacgggaagcaaaaggcatttggggtggattattttcctttccacaatttgaaagttta
ggggctctcaagcggtcagatttagtgaaaaatttacaaatttcgcaacaattaaccact
tttagacacacattcagccattttcatttagatatcacccccattttggtagatctaaat
gtgcaaaaaaaagataaaatcttaccgcttgtagcggaagaaaacgcaggaaattacctt
tctactgtatcttcagaggctgattattggtatgatttcagccaacataatgaaataggt
ttagccacgccggttaaacgcattttagatgagctggcgtttagcgtaacaaatgataat
taa
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