KEGG   Mannheimia varigena USDA-ARS-USMARC-1388: X875_19850
Entry
X875_19850        CDS       T03029                                 
Name
(GenBank) Signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mve  Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve02024  Quorum sensing
mve03060  Protein export
mve03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    X875_19850
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    X875_19850
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    X875_19850
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mve02044]
    X875_19850
Enzymes [BR:mve01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     X875_19850
Secretion system [BR:mve02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   X875_19850
  Eukaryotic Sec-SRP protein
   X875_19850
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin AAA_30 YqeC AAA_31 cobW AAA_28 AAA_14 T2SSE AAA_16 AAA_33 AIP3 DO-GTPase1 NACHT Rad17 ABC_tran VirC1 APS_kinase ATP_bind_1 Helicase_RecD KTI12 TsaE GlnD_UR_UTase Thymidylate_kin AAA_19 TPP_enzyme_M AAA_24 DUF305
Other DBs
NCBI-ProteinID: AHG80599
LinkDB
Position
2104635..2106029
AA seq 464 aa
MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVALPVVREFINKVKERAL
GIEVNKSLTPGQEFLKIVQNELEAAMGEANEELNLAAQPPAIILMAGLQGAGKTTSVGKL
AKFLKERHKKKVLVVSADVYRPAAIKQLQTLAETLKVDFFPTETNQKPVAIAEAALKHAK
LNFFDVLIVDTAGRLHVDGEMMEEIQQIHATLNPVETLFTVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDM
MSLIEDIQRSVDQEKAEKIAAKFKKGDDFTLEDFRDQLIEMKKMGGMMSMLDKLPGAKNL
PDHVKNQVDDKMFIKMEAIINSMTLKERANPEIIKGSRRRRIALGSGTQVQDVNKLLKQF
DDMQRMMKKMRKGGMAKMIRGMKGMMGGSGLGGLGGLSGMFGKR
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctatccgatagactttccaaaacactgcgcaacattacaggtaagggc
cgcctaactgaagacaatattaaagatacgctgcgtgaagtacgtatggcattgctcgag
gctgatgttgcgttacctgttgttcgggaatttatcaacaaagtaaaagagcgtgcctta
ggcattgaagttaataaaagtttaaccccaggacaagaattcttaaaaatcgttcagaac
gaattagaagcagctatgggcgaggcaaatgaggagcttaacttggcagctcaaccgccc
gctattatcttgatggcaggcttacaaggtgcgggtaaaactacctctgtagggaaatta
gcaaaattcttaaaagaacgtcataaaaagaaagtattggtggtttcagccgatgtttat
cgccctgcagcgattaaacagcttcaaacattagctgaaacattaaaagttgatttcttt
ccaaccgaaactaaccaaaaaccagtagcgattgcagaagcagcacttaaacacgctaaa
cttaatttctttgatgtgctgattgtcgataccgcaggtcgcttacatgttgatggcgaa
atgatggaggaaatccaacaaatccacgctacattaaaccctgttgaaacgctctttact
gttgatgcgatgacaggtcaagatgctgctaacacagctaaagcctttaatgaagccttg
ccattaaccggggtaatcttaaccaaagtcgatggtgatgctcgtggtggtgcggcactt
tctattcgccagattactggcaaaccgattaaattcttaggggttggcgaaaaaaccgat
gctttagaacctttccaccctgatcgggtggcttctcgtattctaggtatgggcgatatg
atgtctttaattgaagatattcagcgttcagtcgatcaggaaaaagcggagaaaatcgca
gcaaaattcaagaagggtgatgattttacccttgaagatttccgtgatcagcttattgag
atgaaaaaaatggggggtatgatgtctatgctcgataaactaccgggtgcgaaaaatctc
cctgatcacgttaaaaaccaagttgatgataagatgttcattaaaatggaagctatcatt
aactctatgacattaaaagaacgtgcaaatcctgagattataaagggttcgcgtcgccgt
cgcattgcattaggctctggcacacaggttcaggatgtaaataaactgctcaaacagttt
gatgatatgcagcgcatgatgaaaaaaatgcgtaaaggcggtatggctaaaatgatacgt
ggaatgaaaggaatgatgggcggcagcgggcttggtggtctaggtggcttgagcggaatg
tttggaaaacgctaa

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