Mannheimia varigena USDA-ARS-USMARC-1388: X875_20180
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Entry
X875_20180 CDS
T03029
Name
(GenBank) Monosaccharide ABC transporter substrate-binding protein, CUT2
KO
K10439
ribose transport system substrate-binding protein
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve02010
ABC transporters
mve02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X875_20180
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
X875_20180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mve02000
]
X875_20180
Transporters [BR:
mve02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
X875_20180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
PucR
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
AHG80632
LinkDB
All DBs
Position
2132784..2133722
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AA seq
312 aa
AA seq
DB search
MKSKLFKATLLTSALALSTSLFAAEKPQIALLMKTLSNEYFISMQQGAEEAAKKMNVDLT
IQVAEKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLD
AEAAKKAGLKFNYVGVDNFNGGYLEAKNLAEAMGKKGNVAILEGIPGVDNGEQRKAGALK
AFSEYPDIKIVASQSANWETEQALNVTTNILTANPSIQGIFAANDNMAIGAVTAIENAGL
AGKVLITGYDGIPLAIEYVKQGKMQNTIDQLPKKQVAVAIEHAIKQINKQDIPEVYYIDP
VVIDQAEAKKNY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaaactattcaaagcaacacttctaacaagtgcattagctctttctacttct
ctttttgcagcagaaaaacctcaaattgcattattgatgaaaacattgagtaatgaatac
ttcatctctatgcaacaaggtgctgaagaagcagctaaaaaaatgaatgtagatttaaca
atccaagtagcagaaaaagaagattcaacagagcaacttgttggattagttgaaaatatg
attgctaaaaaagtagatgcaattatcgtcacaccaaatgattctattgcctttatacct
gctttccaaaaggcagaaaaagcaggaatcccaattattgatttagatgtaagacttgat
gctgaagctgccaaaaaagctggcttaaaatttaactatgttggtgtagataattttaac
ggcggttatttagaagctaaaaacttagcagaagctatgggaaaaaaaggaaatgttgct
atacttgaaggtattcctggcgtagataatggcgagcagcgtaaagccggtgcattaaaa
gcattctctgaatatccagatataaaaattgttgcttcacaatccgccaactgggagaca
gaacaggctttaaatgtaacaactaatatattaactgccaaccctagtattcaaggtatt
tttgcagcaaatgataatatggcaattggtgcagttactgctattgaaaatgcaggatta
gcaggtaaagtactcataacaggttatgatggtattcctcttgctatcgaatatgttaaa
cagggaaaaatgcagaatacaattgatcaattacctaaaaaacaagtcgcagttgcaatt
gaacatgcaattaaacaaattaataaacaagatattcctgaagtttattacattgaccca
gtagtcattgatcaagctgaagcgaagaaaaattattaa
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