Mannheimia varigena USDA-ARS-USMARC-1388: X875_2080
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Entry
X875_2080 CDS
T03029
Name
(GenBank) HTH-type transcriptional repressor fabR
KO
K22105
TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mve03000
]
X875_2080
Transcription factors [BR:
mve03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
X875_2080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_32
TetR_C_46
HTH_IclR
HTH_29
DUF3966
Motif
Other DBs
NCBI-ProteinID:
AHG78828
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Position
217913..218548
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AA seq
211 aa
AA seq
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MANGVSVRAIQKEKTRRALVEAAFNQLSPEKSFSNLSLREVAREAGVAPTSFYRHFKDMD
ELGLAMVDESGLLLRQLMRQARKRIANGGSVVVVSVETFFELITDRPNVFRLLLRESSGT
SLAFRTAASREIQHFVAELTDYIMSNDEPCNRKIAYIQAEGLVTLVFTAGSHALDMNNQE
RELLKQRVIMQLRMLIRGSAYYMKQSTCESL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctaatggcgtaagtgttcgtgccattcaaaaagaaaaaacacgccgagcattagtg
gaagcagcatttaaccagctcagccccgaaaaaagcttttctaatttaagtttaagagag
gttgccagggaagcaggtgttgcaccaacctctttttaccgacatttcaaagatatggat
gaattaggcttggcaatggttgatgaatctggcctgctacttcgtcagcttatgcgacaa
gcgcgtaaacgtattgctaatggcggaagtgttgttgttgtttcagttgaaaccttcttt
gaactgattacagatcgccctaacgtattccggctgctactacgtgaaagctcaggtacg
tcattggcattcagaacagcagcctcaagagaaattcagcatttcgttgcagagttaact
gactacattatgagtaatgatgaaccatgcaaccgcaaaattgcttatatccaagcggaa
ggcctggtcacccttgtttttaccgcaggttcgcatgcattagatatgaacaatcaagaa
cgagagttgctcaaacaaagagttattatgcaacttagaatgctaattagaggctctgcg
tattacatgaagcagtctacatgtgaaagcttatag
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