Mannheimia varigena USDA-ARS-USMARC-1388: X875_3180
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Entry
X875_3180 CDS
T03029
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mve03021
]
X875_3180
Transcription machinery [BR:
mve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X875_3180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AHG78938
LinkDB
All DBs
Position
329900..330862
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AA seq
320 aa
AA seq
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MKKFDENEIEDAEIVEAEPIAPEEIAEHESEMAEPMHPALVSASMPVPQGNLDSYIRMAN
QYPILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARGYLGYGLPLADLIQEGNI
GLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVKVATTKAQRKLFFNLRKNKN
RLAWFNEEEIKKVADDLGVTVEEVREMESRMTGQDLGFDLPVGEDDDEAYVPSMYIEDNS
SNFADDLEDEQHNGQATAQLAYALATLDERSQDIIKTRWLDDNKATLQDLADKYNISAER
VRQLENAALKKIKEAITLEE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgacgaaaacgagattgaagatgcggagattgtcgaagcagaaccgatt
gcgccggaagaaattgccgagcacgaaagcgaaatggcggagccgatgcaccctgctttg
gtttcggcttcaatgccggtgccgcaaggtaatttggacagctatatccgaatggcgaac
cagtatccgattctcaccgccgagcaagaaaaagagctggcggagcgttattattacgat
gaagatgttgaagcggcaaagcagctgattctgtcgcatatgcggtttgtgatccatatc
gcccgaggctacttaggctacggcttaccgctggcggatctgatccaagagggcaatatc
ggcttgatgaaagcggtaaaacgctttgatccgaacgttggtgtgcgtttagtttctttt
gcggtacattgggtgaaggcggaaatccacgaatatgtgctgaaaaactggcgaattgtg
aaagtagcgaccaccaaagctcaacgcaaactgtttttcaatttacgcaaaaataaaaac
cgcttagcgtggttcaacgaagaagagattaaaaaagtggcggatgatttgggcgtaacg
gttgaagaagtgcgtgaaatggagtctcgaatgaccgggcaagatctcggttttgacttg
ccggtaggcgaagatgatgatgaagcctacgttccttcaatgtatattgaagataacagc
tccaattttgcggacgatttggaagatgaacagcacaacgggcaagcaaccgctcagctg
gcttatgccttagcaactctcgatgaacgtagccaagacattattaaaactcgctggctg
gacgacaacaaagcaaccttgcaagatttggcggataaatacaacatctccgccgaacgt
gtccgccaactggaaaatgctgcattaaagaaaatcaaagaagcgattacgctagaagag
tag
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integrated database retrieval system
