Mannheimia varigena USDA-ARS-USMARC-1388: X875_3250
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Entry
X875_3250 CDS
T03029
Name
(GenBank) DNA polymerase III psi subunit protein
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve03030
DNA replication
mve03430
Mismatch repair
mve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X875_3250
03430 Mismatch repair
X875_3250
03440 Homologous recombination
X875_3250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mve03032
]
X875_3250
03400 DNA repair and recombination proteins [BR:
mve03400
]
X875_3250
Enzymes [BR:
mve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X875_3250
DNA replication proteins [BR:
mve03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X875_3250
DNA repair and recombination proteins [BR:
mve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X875_3250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
ERCC4
Motif
Other DBs
NCBI-ProteinID:
AHG78945
LinkDB
All DBs
Position
complement(335045..335455)
Genome browser
AA seq
136 aa
AA seq
DB search
MNRRDLLLNEMGISQWVLAKPQVLKGNAQIRLDKKIKLVVICEEDHQNSHFFADLLRALG
LQKSDYSWVDSEQSQRLVFEHSPLVWKILGEEQAVKIANQTAWENNSWKDLAQSQQKRKL
WQQMEAFSAQLEKTDD
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggcgtgatttactgttaaatgaaatgggcatttcgcaatgggtgctggcgaag
ccgcaggtgctaaaaggcaatgcccaaattcgtttggataaaaaaattaaattagtggtg
atctgtgaagaagatcatcaaaacagccacttttttgcagacttgttgcgagcgttagga
ctgcaaaaatccgactatagttgggttgatagcgagcaatcgcaacgtttggtgtttgaa
cattctccgctcgtttggaaaattctaggcgaagaacaagcggttaaaattgcaaatcag
accgcttgggaaaacaactcttggaaagatttagcacaatctcagcaaaaacgtaaactt
tggcaacaaatggaagcattttctgcacaactggagaaaacagatgattga
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