Mannheimia varigena USDA-ARS-USMARC-1388: X875_3920
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Entry
X875_3920 CDS
T03029
Name
(GenBank) hypothetical protein
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Pertactin
AC_1
NtrZ
Motif
Other DBs
NCBI-ProteinID:
AHG79012
LinkDB
All DBs
Position
404676..407279
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AA seq
867 aa
AA seq
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MKKTTLFKLSALSLALAGQYAHADVVNHTCTVSSDCYYSTLHSGITTADGKTNTEYYWYL
NSTKLGKHNDDLEASVTPQHYQNIPSPDDDIRGSNSLIGIGNSDRDAFSLAEIEYKRKAS
LYIPSGTTATVANSGYHNANVVSIRNANAKIDSGVRLQAGESEDEKTLLIAIDVSGESNV
TTSADVILKSRDSVGIWGSDSSTVTAKNHKIELSPESSGVLARDSARVVLENVNITGSKA
LQYALETGGAGSSIEFNRGSIDLTNDILTMAASLGTGKIDINHSSLNANYAVISDAYWYE
DDDYIASHGVININHSNVTGRELFVAVNTDEDTEPLSRDHSTTVNVESSKISGRVANIRD
ASDENDDNELDIHIDTKANTNVDLTMKNSQWTVNGDSHLNGLAMANSTTSLQKTGNQFQT
LTITDYLIGNGHFDLNTDLANQKSDKIVVKGDDSGNFTLGIKDSGNEPQAANGKVTLVET
QTGQAQFSLKDRDYVDAGAYRYRLNKEGTNWVLANHQAESVKDNSVQPTTPAKPVTPAPT
EPTQPVVQPKTVTPTPPVVVQPTQPQPIQPSQPASPGLKALSEKTNALVSLRQAQGVLLS
QNLQGIHQRLGELKTDKVSNVWVKNNNSRSEAKAQNVAADSRSSGFEIDSHSVQIGADRA
INDSLRLGGFVGTSRADVDFNSEYGKGKLHSQAVGLYATFANEQGWYLDNIAKYERLTSK
FADEKRKYNAFSLSSEIGKRFALSNDWSITPQAQLAYHTINGKVDESRLDLFTARAGVRV
AKGFALNNGWNLQPYAEVNAIAEKANNAKVRVNQYQFDVAENKGRVQTALGLTAGNSNHR
LGLEASVTSGSKFKQPLSVLANYRYQW
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacaacattatttaaattaagtgcattaagtcttgcattagcagggcaatat
gctcacgcagatgtagttaatcatacttgcacggtaagttcagattgttattactcaaca
ttacattctggtattacgacagctgatggtaagactaacaccgaatattattggtatctt
aattctactaaattaggtaagcacaatgatgatctagaggcttcggttactcctcagcac
taccaaaatatcccttcacctgatgatgatattcgtggttctaattctttaattgggatt
ggtaattctgatagagatgctttctcccttgctgaaatagagtacaaaagaaaagctagt
ctatatattccatcaggcacgacagcaactgttgctaatagtggttatcacaatgctaat
gttgtatctattagaaatgcgaatgctaagattgattcaggtgttagattacaagcagga
gaatcagaagatgaaaaaacgctactgatagctattgatgtatctggtgaaagcaatgta
acaacttctgcagatgtgatattaaagagtagagactctgtcggtatttggggaagtgat
agttcaacggtaacagctaaaaatcataaaattgaattatcgcctgaatcatcgggggtt
ttagctcgtgatagtgcaagggtagtattagaaaatgtaaatatcactggctctaaagca
ttacaatatgcgttagaaacagggggagcgggaagttccattgagtttaatcggggttct
attgatttaacgaatgatattctaactatggctgctagtttaggtacaggaaaaatagac
attaatcatagtagtttaaatgcaaattatgctgtaatttctgacgcatattggtacgaa
gacgatgattatattgctagtcatggggtaataaatatcaaccatagtaatgtgactggt
agagaattatttgtggctgtgaataccgatgaggatacagagccgctttctcgtgatcat
tctaccaccgtgaatgtggagagcagtaagatctcaggtagagttgcgaatattagagat
gcttcggatgaaaacgacgacaacgaattagatattcacattgatacgaaagctaatact
aatgttgatcttacaatgaaaaacagccaatggacggtaaatggcgatagccatttaaat
gggcttgcaatggcaaattccacaacctcattgcaaaaaacaggtaatcaatttcaaact
ttaacgattacggattatttgatcggcaacggccatttcgatctaaacaccgatcttgct
aaccaaaaatccgataaaattgtggtaaaaggcgatgatagcggtaatttcacattggga
attaaagatagcggaaatgagccacaggctgcaaacggtaaagttacgttagtcgaaact
caaacgggtcaagctcaatttagtttgaaagatcgtgattatgttgatgcgggagcatat
cgttaccgtctaaacaaagagggtacaaactgggtattggcaaaccaccaagctgaatct
gttaaagataactcagttcagcctacaactcctgctaagcctgtaacaccggcacctact
gaaccaactcagccagttgttcagccaaaaactgtcactccaactccacccgttgttgtt
caaccaacacaacctcaaccaatacagcctagccagcctgcttctcctgggttgaaagct
ttaagtgagaaaacaaacgctcttgtctctctccgccaagctcaaggcgtattgcttagc
caaaatttacaaggtattcatcaacgtttaggcgaattgaaaactgataaagttagcaat
gtgtgggtaaaaaataacaatagccgtagtgaggctaaagcccaaaatgtagcggcagat
agccgttcttcaggttttgaaatagattctcatagcgtacaaattggggcagatcgtgcc
attaatgacagtctgcgtttaggtggatttgtcggtacaagccgtgctgatgtggatttt
aatagtgaatatggcaaaggcaagttacactcacaagcggtcggtttatatgcaactttt
gcaaatgaacaaggctggtatctggataacatcgcaaaatatgaacgcttaacctctaaa
tttgctgatgaaaaacgcaaatataatgcgtttagtctttcgagtgaaatcggaaaacgt
tttgcgttgagcaatgattggagcattacacctcaagctcagcttgcctatcataccatt
aacggcaaagttgatgagagccgtctagatctctttactgcccgtgcaggcgtgcgtgtg
gcaaaaggctttgcattgaataatggctggaatctacaaccttatgcagaagtaaatgcg
attgcagaaaaggcgaataatgcaaaagtgcgagtgaatcaatatcaatttgatgtggca
gaaaacaaaggcagagtacaaaccgcattaggtttaaccgcaggcaacagcaaccaccgc
ttaggcttagaggcttcagttacgtctggtagcaaatttaaacaaccacttagtgtgtta
gcgaattatcgttatcagtggtaa
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