Mannheimia varigena USDA-ARS-USMARC-1388: X875_4690
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Entry
X875_4690 CDS
T03029
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve00541
Biosynthesis of various nucleotide sugars
mve01100
Metabolic pathways
mve01250
Biosynthesis of nucleotide sugars
Module
mve_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
X875_4690
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mve01005
]
X875_4690
Enzymes [BR:
mve01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
X875_4690
Lipopolysaccharide biosynthesis proteins [BR:
mve01005
]
Lipid A
X875_4690
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
AHG79089
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Position
479937..480791
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AA seq
284 aa
AA seq
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MTDKIVKVGNIEVANNKPFTLFGGMNVLESRDMALRVCEQYVEVTNKLNVPYVFKASFDK
ANRSSIHSYRGPGMEEGLKIFQELKQTFGVSIITDVHEIYQCKPVAEVVDVIQLPAFLAR
QTDLVEAMARTGAVINVKKPQFLSPGQMGNIVEKIAECGNESVILCDRGTNFGYDNLVVD
MLGFSIMKKVSKGCPVIFDVTHSLQCRDPFGAASGGRRSQVTELARSGMAVGLAGLFLEA
HPDPNSAKCDGPSALPLSTLEAFVSQMKAIDDLVKSFAEIDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaaatcgtaaaagttggtaatattgaagtggcgaataataagccatttacg
ctctttggtggtatgaacgtgctggaaagccgtgatatggcacttagagtgtgtgagcaa
tatgttgaagtgacgaacaaactcaatgtgccgtatgtgttcaaagcctcgtttgataag
gcgaaccgttcttcgatccactcttaccgtgggccgggaatggaagagggtttgaaaatt
ttccaagagttaaaacagacttttggggtgagcatcatcactgacgtgcacgaaatttat
cagtgcaagccggtagcggaagtggtggatgtgattcagctccctgcgtttttggctcgt
caaaccgatttagtggaagcaatggctcgcaccggtgcggtaattaatgtgaaaaaaccg
caatttttaagtccggggcagatgggtaacattgtggaaaaaatcgcagaatgcggtaac
gagagcgtgattttatgcgaccgtggtacaaacttcggctacgataatttagtggtggat
atgctcggtttcagcattatgaaaaaagtgtcgaaaggctgcccggtgatttttgacgta
acccactcgctacaatgtcgtgacccattcggtgcggcttcaggtggtcgccgctcacaa
gtgacggaacttgctcgttcgggtatggcagttggcttggcagggcttttcttggaagct
cacccggatccaaattcagcaaaatgtgatggcccgtcagccttaccactttcaacatta
gaagccttcgtttcacaaatgaaagcgattgatgatttagtcaaatcctttgcggaaatt
gatacgtcaaactaa
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