Mannheimia varigena USDA-ARS-USMARC-1388: X875_5250
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Entry
X875_5250 CDS
T03029
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mve03032
]
X875_5250
03400 DNA repair and recombination proteins [BR:
mve03400
]
X875_5250
Enzymes [BR:
mve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
X875_5250
DNA replication proteins [BR:
mve03032
]
Prokaryotic type
DNA Topoisomerases
X875_5250
DNA repair and recombination proteins [BR:
mve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X875_5250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
ApbA
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
AHG79145
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Position
537839..540529
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AA seq
896 aa
AA seq
DB search
MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTYN
KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM
RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT
NIPPHNLGEVLDGCLAYIENENISVEELMAHIPGPDFPTGAIINGRKGIEEAYRTGRGKV
YVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKIADLVKEKKIEGISKIDDYSDKKGI
SIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLRQIIEAFVKHRREV
VTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTAEEAREGLLARPWALGNVA
PMLEAAGVGASRPEDLPENLGVRDGQYYLSEAQARAILELRLHRLTGLEHEKIVEEYKEL
LTEIGELLHILTSPERLMEVIREELELVKATFNDERRTEITAASGDINIEDLIAQEDVVV
TLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQ
LKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNGEFSADKFIFMATASGVVKK
VSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRFAEKAVRAMGRT
ATGVRGIKLATTEISSEEIEEAEIIEIENEEAEDLTSVSLDTDRVVSLVIPRTEGDILTV
TQNGYGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIMLITDAGTLVRT
RVAEVSLVGRNTQGVRIIRTAEDEQVVSLERVCEPEEDDETTEAFDAETVETSTEE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattagccaaagatattattcccgtaagtattgaggacgaattaaaaacctct
taccttgactacgcaatgtcggtgattgttgggcgtgcattgcctgatgtgcgtgacggc
ttgaaaccggttcaccgccgtgtgcttttctcaatggatcaaaacagcaacacctataac
aaaccacacgtgaaatcagcccgtgtggtgggggatgtgatcggtaaataccacccgcac
ggtgactcagcggtgtacgacaccattgtgcgtatggctcagccgttctcacttcgttat
atgttagtggacggtcaaggtaacttcggttctatcgatggcgatgctccggcggcaatg
cgttataccgaagtgcgtatgcagaaaattacgcaggaattgctcaccgatttagacaaa
gaaacagtagatttctcgccaaactatgacggcaaagagatgattcctgatgtgttgcca
accaaaattccagccttgttagtgaacggttcatcggggattgcggtgggtatggcaacc
aatattccgcctcacaatttaggcgaagtgttagacggctgcttggcatacattgaaaat
gaaaatatcagcgtggaagagctaatggctcacattcccggcccggatttccctacaggg
gcgattattaacggtcgtaaagggatcgaagaagcctaccgtaccggtcgtggcaaggtg
tatgtgcgtgcgaaagcgagcgtagaaaccaccgacaaagggcgtgagcagattgtggtg
actgaacttccataccaagtcaataaagcgaaattgatcgaaaaaatcgccgatttggtg
aaagagaagaaaatcgaaggcatcagcaaaatcgatgactattccgacaaaaaagggatc
tcgattgttattgaagtcaaacgtgatgcagtgggcgaagtggtgttaaatcacctctat
tctttaacccaaatgcaagtgaccttcggtatcaatatggtggcgttggacaacggtcag
ccgaaagtgttgaacctccgccaaatcattgaagccttcgtgaaacaccgccgtgaagtg
gtgactcgccgtaccatttttgaactacgcaaagcccgtgagcgtgcccatattttagag
ggcttggcgattgcattagcgaatatcgaccctgttatcgaattaatccgtgcctccaaa
accgctgaagaagcccgtgaaggcttgcttgctcgcccttgggcattaggcaacgtagcc
ccaatgttggaggctgctggagtgggtgcttctcgtccggaagatttaccggaaaattta
ggcgtgcgtgatggtcaatactatttatcagaagcccaagcccgtgcaattttagagtta
cgcttacaccgtttaaccggcttagagcacgaaaaaattgttgaagagtacaaagaatta
ttaactgaaattggtgaattattacacattttaaccagtccggaacgcttaatggaagtg
atccgtgaagagttggagttagtgaaagcgacctttaacgatgaacgccgcaccgaaatt
actgcagcctcaggcgacatcaacattgaagatttaatcgcccaagaagatgtggtggta
acgctttctcacgcaggctatgtgaaatatcagccgctttcagactacgaagcccaacgc
cgtggtggtaaagggaagtctgcgaccaagatgaaagaagatgatttcatcgaaaaatta
ttggtggcgaacactcacgacaccattctctgcttctcaagccgtggtcgcttatatcaa
ttaaaagtgtaccaattaccgcaagccagccgtggggcaagaggcacgccgattgtgaat
attctgccgttggtgaaagaagagaacgagcgtattaccgcaatcctgccgattccaaat
ggcgaatttagtgccgataaatttatctttatggcaactgcaagcggcgtggtgaaaaaa
gtctcgctcgatgcgttcagcaacgttcgttcaagcggtctaattgcattaaaacttcgc
gaaggcgatgaattaatcggtgtggatattaccgatggcgagagcgaaattatgctcttc
tcggcacaaggtcgagtggttcgtttcgcagaaaaagcagtgcgtgcaatgggacgtaca
gcaaccggggtgagaggtatcaaacttgcaacgactgaaatttcaagtgaagagatcgaa
gaagcagaaatcatcgaaattgaaaatgaggaagcggaagatttaacaagcgtgagccta
gacaccgaccgtgtggtttctcttgtgattcctcgcaccgaaggcgatatcctcactgta
acccaaaacggctacggtaaacgtaccgtcattggtgaatacccagtgaaatctcgtgca
accaaaggggtagtttcaatcaaagtgaacgaacgcaatggtaaagtggtagcagctgtt
caagttgaagaagcagaccaaattatgctgataaccgatgccggcacgctagttcgcact
cgagtggcggaagtgagtttagttggacgaaatacccaaggcgttcgcattatccgcacc
gcagaagacgaacaggttgtgagcctagagcgagtttgcgaaccggaagaggacgatgaa
acgacagaagcattcgatgcggaaaccgtagaaacctcaaccgaagaataa
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