Mannheimia varigena USDA-ARS-USMARC-1388: X875_5960
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Entry
X875_5960 CDS
T03029
Name
(GenBank) CcmA protein
KO
K13926
ribosome-dependent ATPase
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
X875_5960
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
ABC2_membrane
AAA_21
ABC2_membrane_2
AAA_29
RsgA_GTPase
AAA_22
AAA_14
ABC2_membrane_4
AAA_23
AAA_25
RecA
ATP-synt_ab
DLIC
DUF6334
Motif
Other DBs
NCBI-ProteinID:
AHG79214
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Position
623065..625800
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AA seq
911 aa
AA seq
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MTELAVKISHLRHAYKNTVAVDNVSLEIPKGRTVGLIGPDGVGKSTLLSLIAGVKILQQG
EILVFGLDVSKAKDRDILTHKVAFMPQGLGKNLYLTLSIYENIDFHARMFGLSPSQRKAR
IHRLLKATGLLPFADRAAGKLSGGMKQKLSLCCALVHSPELLILDEPTTGVDPLSRRQFW
ELVEELRVETPDMTVIIATAYIDEAEGFEYVMAMDDGKLIVDKPTQAVIAETGSQNLEQA
YIKLLPPEKRGIVDGLVIPPFESLKDEPPVIVAEGLTKKFGDFISVDNVSFVIPKGEIFG
FLGSNGCGKSTTMKMLTGLLEPTEGSALLLGQPIDASNIDTRKRVGYMSQAFSLYEELTV
RENLELHAKLYQIPRSEWSHYVNNVMGQFDLADLAEEKPLSLPLGIRQRLQLAAACLHKP
EVLILDEPTSGVDPAARDMFWEYLIKLSREDRITIFVTTHFMNEAARCDRISFMHRGKVL
GVGTPEELRQGKNAKTLEEAFIIYLEEQNDEVTAPKETVETDEQENSLLQAIKNQQFFAN
GLSVIWTFAVREGKELLRDNIRLLFALLGPLVMLLAMGSSISFDIRPLNFTVLDHDNSSE
SRKLIEAFSGSPYFIRQDNIYSIEDINPSLQTGKAKLVLEIPSDFGRDLLAQRMPEVGIF
IDGAFPSTAENLRGSAQGVIGQYMQEMLRENGISANMPSVTEPRMIYNQDFKSVFAMTPG
IIMLAMMLVPPMMTALSVVREKEMGTIMNLYGSPASQFQFLLGKQLPYIALSFISYLIMV
LAAIFVFGVPIKGSITAMFLGVLLAICASTGFGLLVSSFVKSQVAAIFAAAIISIVPTIN
FSGMMYPVSRLDENVQLVSKIFPGAWFQQISLGGFTKGLGFADFLQPYLALAVIYAVYLA
LATFALKKQEK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacttgcggttaaaattagccatcttcgccatgcttataaaaatactgtagcg
gttgataatgtttcacttgaaattccgaaaggcagaacagttgggcttattggccctgat
ggtgtgggtaaatctacgctactttcgctgattgccggagtaaaaattctccaacaaggg
gagattttggtgtttgggctagatgtatcaaaagccaaagaccgagacatcttaacccac
aaagttgcatttatgccgcaaggtttagggaaaaacctttatcttaccctttctatttac
gaaaatattgatttccatgcccgaatgtttggactctctccaagccagcgaaaagcacgt
attcatcgtttgctaaaagcaacggggctgttaccgtttgccgatagagcagcaggcaaa
ttatcaggcggaatgaagcaaaaactcagcctttgctgtgcgttggtgcatagccctgaa
ttactgattttagatgagccaacaacaggggtagatccactttcacgccgccaattttgg
gaattagtcgaagaattgcgtgttgaaacaccagatatgacagttatcatcgccaccgcc
tatattgatgaagccgaagggtttgaatatgtaatggcaatggacgatggcaagctaatt
gttgataaaccaactcaagctgttattgctgaaacaggcagccaaaatttagaacaagcc
tacattaaattattaccacctgaaaaacgggggatagttgatggtttggttattccgcct
tttgagtcgttaaaagatgaaccacctgttattgtggcagaaggtttaaccaaaaaattt
ggcgattttatttcagtagataatgtgagctttgtgattccgaaaggtgagatttttggc
tttttaggctctaacggctgtggaaaatccaccacaatgaaaatgctaaccggtttgctg
gagccaaccgaaggctcggcattactgcttgggcagccgattgatgcgagcaatatcgac
acccgaaaacgggttggctatatgtcgcaggcattttcactttatgaagaactgacagtg
cgtgaaaatcttgaattgcacgccaaactgtatcaaattccacgcagcgagtggtcgcat
tacgttaataatgtaatgggccaatttgatcttgccgatttagctgaagaaaaaccgtta
tctttgccgcttggtattcgccagcgcttacagcttgcggctgcttgtttgcataaacct
gaagtgttgattttagatgaaccgacttcgggagtggacccggcagctcgtgatatgttt
tgggagtatttaattaaactttccagagaagatcgtattaccatttttgttactacccat
tttatgaatgaagcggctcgttgtgatcgcatttcttttatgcacagaggaaaagtactt
ggcgttggtacacctgaagaattaaggcaaggtaagaatgcgaaaacacttgaagaagcc
tttattatctacttagaagagcaaaacgatgaagtgactgccccgaaagagacggttgag
actgatgagcaagaaaatagcttattacaagcgatcaaaaatcagcagttttttgcaaat
gggctgagtgtcatctggacttttgccgtacgtgaaggaaaagaactgttaagagacaat
atacgtttactatttgctttgcttgggccgttggtcatgctgctggcgatgggttcaagt
atttcttttgatatcagacctttaaattttaccgtgcttgatcacgataatagctcggaa
agccgtaaattgattgaagctttttccggttcgccttattttattcggcaagataatatt
tattcgatagaggatataaaccccagcctccaaacaggcaaagcaaagctggtattagaa
attccgtctgatttcgggagagatctattagctcaaagaatgcctgaggtcggtatattt
attgatggagctttcccaagcaccgcagagaatttacgaggttctgcacaaggcgttatc
gggcaatatatgcaggaaatgttaagagaaaatggtattagtgcgaatatgccttctgta
actgaacctcgaatgatctataaccaagatttcaaaagtgtatttgcgatgacacctggc
attattatgcttgcgatgatgcttgtgcccccaatgatgaccgcacttagcgtagtcaga
gagaaagagatgggaacgattatgaacctctacggatcgcctgcttctcaattccagttt
ttgttaggcaagcagcttccttatattgcactttcatttatcagctatttaattatggta
ctggcggcgatttttgtatttggggtgccgattaaaggctcgataaccgcaatgttctta
ggtgtgttattggcaatttgtgcttcaaccggctttggcttattggtgtctagctttgtg
aaatcgcaagtcgccgctatttttgccgccgcaattatttcaattgtaccgacgattaat
ttctcgggaatgatgtatccggtttctcgtttagatgaaaatgtgcagctggtttcaaag
attttccctggggcttggttccagcaaatcagcttaggtggatttaccaaaggacttggc
tttgccgatttcctccagccttacttggcactcgcagttatttacgccgtttatcttgca
ttagcaacttttgcgttgaaaaaacaggagaaatag
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