Mannheimia varigena USDA-ARS-USMARC-1388: X875_6090
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Entry
X875_6090 CDS
T03029
Name
(GenBank) Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X875_6090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mve02000
]
X875_6090
Transporters [BR:
mve02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
X875_6090
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHG79227
LinkDB
All DBs
Position
640522..642069
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AA seq
515 aa
AA seq
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MLKVLQVVKIAKKFTKMTACVLLITSCDKLNSPKPVSQSPTETQPSSSKLKRAIYSAVFQ
LDPHKVKVSADAAPLRDLLIGLMAYDVKGNVVPAIAQNWFTEDEKSWLFILDDKATWSNG
KAVIAQDFVASWQRLIDPTAHSLLAKYLVYMGVENAKAITEQQKPVSELGVVALNDHTLQ
IRLNQPNRQLPEMLAHVALLPTYQGKIPNTTDFISNGVYQIKQIADKKLVLQARSEDVAF
QTVEYNLITTIQNYSPFDIVENPLSSQKTNVVKLPRLCSYYYEFNFNDEQLSKKEVREAL
RAMVASANIGQAYGVPSQSVIPHNLVKDREKQWQPIIVEKLLTKAGVSLHNPLKLTLLYD
DSEMNSNIANQITRTLSQSELFNITPRPVDWQTANNLREQKDYQLIRSGWCADYPDPLIF
LQKFHSESPDNHSGYKNDLVDEKLNQLQTETLNEEQRSLLIKEINDQLYNDVAVLPLFQY
QNRVGVVSSLWGIDLSNDSEVIYSKDLKRISEQKD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagttttacaagtggttaaaattgcaaaaaaattcacaaaaatgaccgcttgc
gttttgctgatcacctcttgtgataaattaaatagcccgaaaccagtttcgcagtcacct
accgagacccaaccaagtagctctaaacttaagcgtgctatctattctgcagtttttcag
cttgatccgcataaagttaaggtttccgctgatgctgcacctctacgagatctattaatc
ggtttaatggcatacgacgtaaaaggcaatgttgtaccagctattgcacaaaattggttt
actgaagatgaaaaatcgtggttatttattttagacgataaagccacttggtcgaacggt
aaagctgttatcgcacaagattttgtggcgagttggcaacgtttgattgacccaacagct
cattcgttgttggcaaaatatctggtttatatgggggttgaaaatgccaaagcgattaca
gagcaacaaaagcctgtgtcagaattaggggtagtagcattaaatgatcatacgctacaa
attcgccttaaccagccaaatcgtcaattgccagaaatgttggcacacgtcgcattactg
ccgacttatcaaggtaaaatccctaatactacagattttattagcaatggagtttaccaa
atcaaacaaatagcggataaaaaacttgttctgcaagcgcgttctgaagatgtagcgttt
caaaccgtcgagtacaatttaattacgactattcaaaattattcgccatttgatattgtg
gaaaatccgctatcaagccagaaaactaatgtagttaagcttcctcgtttatgttcatat
tattatgaatttaattttaacgacgaacagcttagtaagaaagaagttcgtgaagcatta
agagcaatggttgcttcggcaaatattgggcaagcttatggggttccaagccagtcggtt
attccacataatttagtaaaagatcgagaaaaacaatggcagccaatcattgttgagaag
ctgttaacgaaagcaggtgtgagtttgcataatcctttaaaactcacgttgttatatgat
gatagtgagatgaatagtaatatcgcaaaccagattactcgcacattatcacaatcagaa
ctgtttaatatcacgcctagaccggtggattggcagacggctaacaatttacgtgagcag
aaagattatcagttaatacgctccggttggtgtgcagattaccctgatccactcattttt
ttacagaaatttcattcagagagcccggataatcactctggctataaaaacgatttagtt
gatgaaaagttaaatcaattacaaacagaaacgctcaacgaagagcagcgctcactcttg
attaaggagattaacgaccagctttataacgatgttgcagtattaccgttatttcagtat
caaaaccgagtaggcgtagtttcctccctttggggtattgatttaagtaacgatagcgaa
gtaatttatagcaaggatttaaaacgaatttcagaacaaaaggattaa
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