Mannheimia varigena USDA-ARS-USMARC-1388: X875_6130
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Entry
X875_6130 CDS
T03029
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mve03016
]
X875_6130
Enzymes [BR:
mve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
X875_6130
Transfer RNA biogenesis [BR:
mve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
X875_6130
Prokaryotic type
X875_6130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHG79231
LinkDB
All DBs
Position
644808..645593
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AA seq
261 aa
AA seq
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MKIALGIEYDGSRYFGWQKQETVESVQQKLEQALSVVANSPVEVFCAGRTDAGVHGTGQV
VHFETEVNRPLQSWCFGTNAHLPDDIAVKWAVEVSEDFHARFSATARRYRYIIYNSKLRS
AILPKGITHFHFPLDENKMHQAGQFLLGENDFSSFRAAKCQSHTPWRNIHHLNVSRQGNY
VIVDIQANAFVHHMVRNIVGTLLEIGQGRQPVEWAKWVLEQRDREKAAPTAKAEGLYLVE
VHYPERFGIPKTALGPLFLAD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcattaggcattgaatatgacggtagccgctattttggctggcagaagcaa
gagacggtggaaagcgtacaacaaaaactagaacaagccttatcggttgtagcaaattca
ccggtggaagtgttttgtgccggcagaaccgatgccggcgtacacggcacagggcaggtc
gtgcattttgaaacagaagttaatcgaccgctgcaaagttggtgtttcggcaccaatgct
catttaccggatgatattgcggtgaaatgggcggtggaagtcagtgaggatttccacgct
cgttttagtgccactgctcgccgttatcgttatattatttataacagcaaattacgctca
gcaattctgccaaaaggcattacccattttcattttccgttggatgaaaacaaaatgcac
caagccgggcagtttttattgggcgaaaatgatttttcctctttccgtgcggcaaaatgc
caatcccataccccgtggcgaaatatccaccatctaaatgtttcccgtcaaggcaattac
gtgattgttgatattcaagccaatgcttttgtgcatcatatggtcagaaatattgtcggc
actttgcttgaaatcgggcagggcagacagccggtagaatgggcaaaatgggtgctagag
caacgagatagagaaaaagccgctcccacagccaaagcggaaggtttgtatttggtagaa
gtgcattatccggaacgtttcggtattccgaaaacggcattaggacccctgtttttggca
gattaa
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