Mannheimia varigena USDA-ARS-USMARC-1388: X875_6240
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Entry
X875_6240 CDS
T03029
Name
(GenBank) ClpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mve03110
]
X875_6240
Chaperones and folding catalysts [BR:
mve03110
]
Heat shock proteins
HSP100
X875_6240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
NBD_SMAX1
Sigma54_activat
AAA_14
nSTAND3
ATPase_2
TniB
AAA_24
bpMoxR
IstB_IS21
AAA_7
NACHT
AAA_25
AAA_19
DNA_pol3_delta2
Torsin
Motif
Other DBs
NCBI-ProteinID:
AHG79242
LinkDB
All DBs
Position
complement(655933..658485)
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AA seq
850 aa
AA seq
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MTTKLQEALAESQSLAVGKDNPYIEPAHLLYALVKQDGGSVAPLFTALNINVQTLISELQ
AILDRLPQVQGGSTQVSQQLVRLLNQSDKLAQQFGDSFISSELFVLASVEDNGDLGKLWK
KFGLSKEKLTQAISQIRGGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEI
RRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIA
GAKYRGEFEERLKAVLKELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE
LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITD
PAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQ
ALQKEEDEASRQRLAKLDEEMAAKEREYSELEEIWKAEKSALLGTQHIKEELENARIAMD
QARRENNFEKMSELQYGVIPNLEKQLQAVENGEKNAETQLLRTKVTEEEIAEVLSKATGI
PVSKMMEGEKEKLLRMEEVLHARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGP
TGVGKTELSKTLAHFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAV
RRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQ
DNAHKGYDVVKEMVMEVVGHHFRPEFINRIDETVMFHSLGKDHIRSIAKIQLQRLITRLA
ERGYSLTVTDAALDHIGNAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKPVTVD
YQDGTIVATQ
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaaactgcaagaagcgttggcagagtcccaatcgcttgcggttggaaaagat
aacccttatatcgaacctgcccatttactatatgcgttagtgaaacaagatggcggttct
gttgccccactctttacagcattaaatatcaatgtgcagaccttgattagcgaattgcaa
gccattttagaccgcttgccgcaagtgcaaggtggaagcacacaggtttcacaacaatta
gtgagattgttaaatcaatcagacaagttggcacagcaatttggcgatagctttatttcc
tctgaattgtttgtgttggcatctgttgaagacaatggcgacttaggtaaattatggaaa
aaatttggcttaagcaaagaaaaactcacacaagcaatcagccaaattcgaggaggagaa
aatgtgaataatcaaaacgcagaagaaacccgtcaagcattgcaaaaatataccattgat
ttaaccgagcgagcgaaagccggcaagttagatcctgttatcgggcgtgatgaagaaatt
cgccgtgcagtgcaagtattacaacgccgcaccaaaaacaacccagtgcttatcggtgaa
ccgggcgtaggtaaaacagcaattgtagagggattggctcaacgcattgtcaatggcgaa
gtgccggaaggtttgaaaaacaaacgtgtgctatcgctcgatatgggagccttaattgcc
ggggcgaaataccgtggtgagtttgaagagcggttaaaagcggtgctaaaagagcttgcc
aaagaagaaggacaagtgattttattcattgatgaaatccacacaatggtcggtgcaggt
aaaacagacggtgcaatggatgccggcaacctgctcaaaccgagccttgctcgaggcgaa
ttacactgcgttggggcaactactcttgatgaatatcgtcaatacattgaaaaagatgcg
gctcttgaacgccgtttccaaaaagtgttagttgatgaaccgacggtggaagataccatt
gcaattttgcgtggtttgaaagagcgttatgaaatccatcatcacgttcaaattaccgat
cctgcgattgtagcggcggcaacgctttcgcaccgttatgtatctgaccgccaattacca
gataaagcgattgacttgattgatgaagcagcttcaagtctgcgtatggaaattgattcc
aaacctgagccgttggataaattagaacgccgtattattcagctcaaattggaacgccaa
gcgttacaaaaagaggaagatgaagccagccgtcaacgtttagcgaaattagacgaagaa
atggcagccaaagagcgtgaatattcggagctggaagaaatttggaaagcggaaaagtcc
gccttgcttggcacgcaacacattaaagaagagttggaaaacgctcgcattgcgatggat
caagctcgccgtgagaacaactttgaaaaaatgtctgagttgcaatatggcgtgattcca
aacttagaaaagcagttacaagcggtcgaaaatggcgaaaaaaatgcagaaacgcaatta
cttcgcactaaagtaaccgaagaagaaattgccgaagtgctttcaaaagcgactggcatt
cctgtttctaagatgatggaaggcgagaaggaaaaactccttcgtatggaagaggtattg
cacgctcgtgttatcgggcaaaatgaagcggttgatgcggtggcaaatgccattcgccgt
agccgtgcagggctttctgatccgaataaaccgattggttcgttcttatttttaggcccg
accggcgtgggtaaaacggaattaagcaaaacattagcccacttcttgtttgatgaccct
gatgcaatggtgcgtattgatatgtctgagtttatggaaaaacacagcgtgtctcgcttg
gtgggagctcctccgggctatgtgggctatgaagaggggggctatttaactgaagcagtt
cgccgccgcccatactctgtcgttttacttgatgaggtggaaaaagctcaccctgatgta
tttaacattttactgcaagtgttagatgacggacgtttaaccgacgggcaaggcagaacg
gtagatttccgcaataccgttgtgattatgacctcaaacttaggttcgcatctcattcaa
gataatgcacataagggctatgatgtggttaaagagatggtaatggaagttgttggacac
catttccgccctgaattcatcaaccgcattgatgaaacggtaatgttccactcgttagga
aaagaccatatccgctcaattgcgaaaattcagctacaacgcttaattactcgcttagca
gaacgtggttatagcctaaccgtaaccgatgcagctttagatcatatcggcaatgcaggc
tttgacccattgttcggtgcaagaccacttaaacgtgcaattcaacaagagcttgaaaat
ccacttgctcagcagattttaagcggtaaattattaccaaataaacctgtaacggtggat
taccaagacggcactattgtggcaacgcaataa
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