Mannheimia varigena USDA-ARS-USMARC-1388: X875_6560
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Entry
X875_6560 CDS
T03029
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mve03016
]
X875_6560
Transfer RNA biogenesis [BR:
mve03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
X875_6560
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
CLAMP
Motif
Other DBs
NCBI-ProteinID:
AHG79274
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All DBs
Position
685147..686097
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AA seq
316 aa
AA seq
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MNSIPKIILAPMQGVLDPFVRNLLTSVNEYDLCISEFVRVVDQKLPKKAFYRLAPELYQG
GLTDSGTPVRVQILGQHPQWLAENAALAIELGSHGVDLNCGCPSKTVNGSNGGASLLKEP
DLIYRATKAMREAVPNEQIVSVKVRLGWDSAEQCFEIADAVQQGGANEITVHGRTKSDGY
RAERINWQAIGEIQKRLAIPVTANGEIWDFESAKNCQKITACNTLMIGRGALNTPNLSKV
VKYNEPKMTWNEVLQLLFKYVQMENQFDTGFYHVARIKQWLRYLDKEYPQAAELFDILKT
EHGYDGLKAHIEKAVG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaattccaaaaatcattctcgctccaatgcaaggggtgttagatcccttcgtt
cgtaaccttttaacctctgtgaatgaatacgatctctgtatttctgaatttgtgagagtc
gtcgatcaaaaattaccgaaaaaagctttttatcgtttagcaccagagctttatcaaggc
ggattaacggattctggcacgccggtgcgagtgcaaattttaggtcagcacccccaatgg
ttggctgaaaatgcggcacttgcgattgaacttggctcgcatggggtagatctcaactgc
ggttgcccttctaaaactgtaaatggaagtaacggtggagcatcgttgctcaaagagcct
gatttaatttaccgagcgacaaaagcaatgcgggaagcagtgccaaatgaacagattgtg
tctgtcaaagtgcgtttaggttgggattctgctgagcaatgttttgaaattgccgatgct
gttcaacaaggtggagcaaatgaaattaccgtgcacggaagaacaaaatcagacggttat
cgtgccgaacgtattaactggcaagcgattggcgaaattcaaaagcgtttagctattcct
gtaactgcaaatggtgaaatttgggattttgaatctgcaaaaaattgccaaaaaataacc
gcttgcaatactttaatgattgggagaggtgcattaaatacgccaaatttgagtaaagtc
gtgaaatataacgagccgaaaatgacatggaatgaggttttgcaactgctgtttaaatat
gtacagatggaaaatcagtttgacacaggcttttaccacgttgctcgtattaagcaatgg
ctgcgttatttggataaagaatatccacaagcagcagaattatttgatattttgaaaact
gaacacggctatgatggtctaaaagcacatattgaaaaggcggtgggctaa
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