KEGG   Mannheimia varigena USDA-ARS-USMARC-1388: X875_6920
Entry
X875_6920         CDS       T03029                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
mve  Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:mve00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mve02048]
    X875_6920
Enzymes [BR:mve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     X875_6920
Prokaryotic defense system [BR:mve02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    X875_6920
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD ResIII HD Helicase_C PhoH AAA_22 HDOD nSTAND_NTPase5
Other DBs
NCBI-ProteinID: AHG79310
LinkDB
Position
724587..727016
AA seq 809 aa
MKNEYFAHIRKSDEVIQSVLTHLLETAQIARILATKLDLAEAGELLGLMHDFGKYSEKFQ
KYIRRVTGMLNQADLDSEDETNGGDHSTAGAQWIYRRLIKYGSNGIGELCGQILGLCIAS
HHGAGLIDCLSPEGRAVWRDRFNKDDKDAHLSECAQKADKSILERAEQLASESLIQSLRK
PIAAILSQQDVPFKIKELYLACLTRFLFSCLIDADRINSADFEREAQKEIRRFNEKPNWQ
QAIEALENHLSRFEIKYPIDQIRRNISKDCLTRAGDKQGIYSLTVPTGGGKTLATLRYAL
HHAQTHQLDRIIYIIPYTSIIDQNAQNVREILGDDWVLEHHSNIEPEKQTWQNKVLSENW
DKPIIFTTMVQFLDAWFSGGTRGVRHIHAMTRSVLIFDEIQTLPIKCVHLFSNVLNWLAQ
FGKSTAVLCTATQPLLNQLKKPELGQVKLAENAELMGNQQNLTALFDDLSRVEIHYRSQA
GGFSLENAGEFLLEQFKLHSSCLFIVNTKKWAQDLYRYCQEHHIPQDALFHLSTNQCSAH
RKVIFEQIKDRLQNKEPVICISTQLIEAGVDISMACVIRALGGLDSIAQAAGRCNRHGEK
EGKGQVYVLNLKEPNLEEVLPDITIGQDKAVRVFGEYEGKDILQPAAMTQYFKYYFHDRS
DEMVYPLKNSTSGSLLDWLSDNCHNVYTPKNDRRTQPFPLLMQSFKSAGREFQVIDAPTQ
AVIVPYGEGKEIITTLCSVEDNKKKYEALAKAQRYSVNVFPNVWRKLAEAEALQETQAGS
GIYYLDERHYLDEYGLCTDRAGNMTCYDF
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgaaaaatgaatactttgcacacattagaaaatctgatgaggtgattcaatctgttcta
acccatcttttggaaaccgctcaaattgctcgcattttggcaactaagttagatttagct
gaggccggagaattacttgggctgatgcacgattttggtaaatattccgagaaattccag
aaatatattcgccgagtgaccggcatgttaaatcaagcagatttagacagtgaagatgaa
accaacggcggcgaccattccaccgcaggggctcagtggatttatcgccgtttgataaaa
tatggttcgaacggtattggcgagctttgcgggcagattttagggctatgtattgcctct
caccacggtgcaggcttgattgactgtttaagtccggaaggtagggcggtttggcgagac
cgttttaataaggacgataaagacgcccatcttagcgaatgtgcgcaaaaggcggataaa
tccattcttgaacgtgctgagcaattagcttctgaatccctcattcaatcccttcgaaaa
ccgattgccgcaatattaagtcagcaagatgttccatttaaaattaaagagctttattta
gcctgtttaacccgttttttatttagttgtttgattgatgccgaccgtataaatagtgct
gatttcgagcgggaagcacaaaaagagattcgccgtttcaacgaaaaaccaaattggcaa
caggcgattgaggcattagaaaatcatttatctcgttttgaaattaaatatccgattgac
caaattcgccgtaatatttccaaagattgcttaacacgagccggtgataaacaaggtatt
tattcacttaccgtgccaaccggcggaggtaaaacccttgccactttgcgttatgcgtta
catcacgctcaaacacaccaacttgatcgcattatttacattattccctacacatcaatt
atcgatcaaaatgctcagaatgtgagagagattctgggcgatgattgggtgttagagcat
cattccaacattgagccggaaaaacagacttggcaaaataaagtgttatctgagaactgg
gataagccgattattttcacgacaatggtgcaatttcttgatgcttggtttagcggtggc
acgcgtggtgttcgtcatattcacgccatgacaagaagcgttttgatttttgatgaaatt
caaaccctgcccattaaatgcgttcatctgttttccaatgtattaaattggcttgcccaa
tttggtaaaagtaccgccgttttatgtaccgcgacacaacctttattaaatcagctcaaa
aagccggaattagggcaagtgaaattagcggaaaacgcggagttaatgggaaatcaacag
aatttaaccgcactttttgatgatctctctcgtgtagaaatccattatcgctcgcaagcg
ggcggattttcgctagaaaatgcaggtgagtttttgttagaacagttcaaattgcattcc
agctgtttatttattgtgaataccaaaaaatgggctcaggatttgtatcgttactgtcag
gagcaccacattccccaagatgctctttttcatttaagtaccaatcaatgttctgctcat
cgaaaagtgatttttgagcaaattaaagaccgattacaaaataaagagccggtgatttgt
atcagtactcaacttattgaagcgggtgtagatatttctatggcgtgcgtcattcgtgcc
ttaggcggtttggatagcattgctcaggcggcagggcgttgtaatcgtcacggtgaaaaa
gagggcaaagggcaagtttatgtgctaaatctgaaagaacccaatttagaagaagtcttg
ccggatattacaatcgggcaagataaagcggttcgggtatttggtgaatatgaagggaag
gatattttacaaccggcggcaatgacacaatatttcaagtattatttccacgatcgcagt
gatgaaatggtttatccgctcaaaaacagtacatcgggatctttgctggattggttgtca
gataattgccacaatgtttataccccgaaaaatgatcgaagaacccaacctttcccgtta
ttgatgcaatcctttaaaagtgcggggagggaatttcaagtgattgacgccccaacccaa
gcggtcattgtgccttacggtgagggaaaagagatcattacgacattatgtagcgtggaa
gataacaaaaagaaatatgaagctcttgccaaagcacaacgatatagtgtgaatgttttc
cccaatgtgtggcgaaaattggcggaagcagaggctttacaagaaacgcaggctgggtcg
ggaatctactatttagatgaacgccattatttagacgaatatggtttatgtacagaccgt
gcaggcaatatgacctgctatgatttttaa

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