Mannheimia varigena USDA-ARS-USMARC-1388: X875_9190
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Entry
X875_9190 CDS
T03029
Name
(GenBank) Surface antigen (D15), outer membrane protein
KO
K07278
translocation and assembly module TamA
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mve02000
]
X875_9190
Transporters [BR:
mve02000
]
Other transporters
Pores ion channels [TC:
1
]
X875_9190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
Motif
Other DBs
NCBI-ProteinID:
AHG79537
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Position
953074..954942
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AA seq
622 aa
AA seq
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MKTKLHFLTICCLVAFASMAQAEQPQTNEQAQNNQQDRITDVDQERIGELEDTLSDDLDD
EEKLEALVDLEVKGIHDKEAKKNVDLYLAQISNEYADGAERHQYLVQTTVDKALRALGYY
NSQYQFVQLPRSGKKPLLVLNVELDKETVKIDETDIVLQGEAKNDEDFMALIKKAPKQGS
RLNHKTYENFKGNIESNAFSKGYFDGHWLYHRLEVYPTDHKADWRLGYDSGIRYRYGQIN
FVDSQIKEEYLRNILKINSGEHYFANDLSNLTQDYLSSNWFSSVMVEPHLNEQDKTVDLN
VLFQPKKKNEVEIGIGYETEVGPRLQFNWKKPWRNKRGHSIDTRTYISAPEQRFEFGYNI
PLKKDPLHYYYQISGTVENEDQKDTKSTAASFSLQRFWTRTTGWSFSAGVRARYDSFTQA
NDKFKTLLVYPTASLNRTRTDGKPYPLWGDSQKLTVNWGSKIFGSDVNFYSYKASTSFVR
TYAGNHRFYLRAELGYLKANQFERIPPALRFFAGGDMSVRGFGYKDISPRDPVNGKRVGG
SHLATGTLEYQYQVYPNWWGAAFYDVGLAANKFETKQLHHGTGLGVRWASPIGAIKFDVG
MPVKSPDNKRGFQIYIGLGSDI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaactacattttttaactatttgttgcttagtggcgtttgcatctatggct
caggctgaacaaccacaaactaacgaacaagctcagaataatcaacaagatagaattact
gatgttgatcaagaaagaattggtgaattggaagatacactctcagacgatcttgatgat
gaagaaaaactggaagccttagtagatttagaagtcaaaggcattcacgataaagaagca
aagaaaaatgttgatttgtatttagctcaaatttcgaatgaatatgctgatggggcagaa
cgccatcaatatttagtacagacaactgtggataaagccctgcgtgcgttgggttattat
aatagccaatatcaatttgtgcagctgccgagaagtggcaagaagcctttattggtactg
aatgtagagctggataaagagactgtcaaaattgatgaaaccgacattgtgttacaaggc
gaggcgaaaaatgatgaggattttatggctcttatcaaaaaagcccccaagcaaggctct
cgtttaaatcataaaacctatgaaaactttaaaggtaatattgaaagtaatgccttcagc
aaaggttattttgacgggcattggctctatcatcgtttagaggtttacccaactgatcat
aaagccgactggcgtttaggctatgatagtggcattcgctatcgctacgggcaaattaat
tttgtagatagccaaattaaggaggaatatttacgcaatattctgaagattaattcagga
gagcattactttgccaatgatctttcaaacttaacccaagattatttatccagtaactgg
ttttcatcggtaatggttgaaccacatctcaatgaacaagataaaacggtagatttaaac
gtactgttccaaccgaaaaagaaaaatgaggttgaaattggtatcggttacgaaactgag
gtagggcctcgtcttcaatttaactggaaaaaaccgtggcgaaataaaagggggcatagt
attgatacccgaacttatatttccgcccctgagcagagatttgaattcggttacaacatt
ccactaaaaaaagatccgcttcactattactatcaaatatcaggtacggttgaaaatgaa
gatcagaaggatactaaatcaacagcagcaagcttttctttacaacgtttttggactcga
acaacaggttggtcattctctgctggtgtaagagctcgttatgattcctttacgcaagcg
aatgataaatttaaaaccttattagtttatccaaccgcctcattaaaccgtactcgtact
gatggtaagccttatccgctttggggggatagtcaaaaacttactgtaaattggggcagc
aaaatatttggctctgatgttaacttttatagctataaagcctctacttcgtttgtgaga
acttatgcaggtaatcatcgtttctacttaagagcagaattaggttatttgaaagcaaac
caatttgaacgcataccgcctgccttacgcttttttgcggggggcgatatgagtgtacgt
ggttttggctataaagatatttcaccaagagatccggtaaatggaaagcgtgtgggtggc
tcccatttagctactggtactcttgaataccaataccaagtttacccgaactggtgggga
gcggcattttatgatgtgggcttagcagctaataaatttgagacaaagcaactacatcac
gggacaggtttaggtgttcgctgggcttcgcctattggtgcaattaaatttgacgtgggt
atgcctgtaaaatcgccagataataaacgtggtttccaaatttacattggtttaggctca
gatatttaa
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