Mycoplasmopsis verecunda: SAM46_01105
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Entry
SAM46_01105 CDS
T09525
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mver
Mycoplasmopsis verecunda
Pathway
mver03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mver00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAM46_01105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mver03021
]
SAM46_01105
03400 DNA repair and recombination proteins [BR:
mver03400
]
SAM46_01105
Enzymes [BR:
mver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAM46_01105
Transcription machinery [BR:
mver03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAM46_01105
DNA repair and recombination proteins [BR:
mver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAM46_01105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WPB54739
LinkDB
All DBs
Position
234044..238561
Genome browser
AA seq
1505 aa
AA seq
DB search
MNNFDKEQDELVEQINKITLSLATDKDILEWSHGEVTRPETINYKSYRPEKDGLFDELIF
GPVTDYKCPICNTKYKKSDENSVCTKTPACEKYRPVILPKITRRSRMGHIKLHNPVVHFW
FFKIDHSIISKLLGLRVADSTKQVTKADLEKLIYYKSHIVLESGNLTSLKKNTIIDINEA
AVIYEAALEEMLGHYEPDTYEYEDIETALIELREYAESKIGKDFGIDFYQYNEIIHEYSD
AKIDTGSRAIEYLLTHIDLEKEAQSVQEEIDKINAEMDVEAGLSSTKDQDRSKLYKRLTV
INSFIKSGQDPKSMLIYNLPVIPADLRPLVQLDGGRHSTSDVNELYRRIIIRNNRLAKWN
EADAPMLIKQNEYRMIQEAVDALIDNARKKPTPVVSKDSHPLKSISDALTGKKGRFRQNL
LGKRVDYSGRSVIVVGPSLRMHEVGIPRDMAAKLFEPWIIKEIIKGEPSITSVKSAKKKI
DSLDPIIWPYVEKAIEGRPVLLNRAPTLHRLSIQAFQPVLIRGKAIKLHPLVTTAFNADF
DGDQMAVHVPISDQAVREAKELMLASKNILGPKDGEPIINPSQDMILGLYYLTIEKAGQK
GEGNFYGSFDEMMLAYENGYITLHTRVVLPVSALNKESVSKFTNAPYLVSTVGKFILNKA
FPSDFDFIFGKYVTRKEVMQADGTAKVSESEKIDYSEKDLYKYVLQYGDNFVEKVAQMPV
NLALAKKDIAKIVRKVYEKYVAVVTLEDIANIINDTTQDNFEDRFSSCAELVDFANNPIP
TSHARIISNSIKEHFEAINFEWTKKNMHADYMSHPVWTLKEYTKVLENVWFDYTNYVASI
LDRVKNLGFKFSTISGTTISMNDITTLNTTAEKIKKGEEYTDQLKKFFEEGYLTDDERYT
LTIQKWSEVKDSIEKDLKEVTKSDIDNPLFMMFTSGARGNSSNFTQLAGMRGLMNNNTKV
LKADAENDRVVRSTVEIPVKSSFLSGLTAYEFYSSTHGARKGLTDTALNTAKSGYLTRRL
VDVAQGIVVRQDDCGSDFGFIVKDIKDTKTDTVIESLQERIEGRFTNKAILDENGNELVP
ANTLITPELADKIVNEYGQKQVEIRSVLSCHTKNGVCKHCYGKDLATNRIVNIGEAVGVV
AAQSIGEPGTQLTMRTFHTGGVAGVEDITGGFGRLIELIDAYDFPWGKPAVISTVYGTVV
NIAPAKDKNGNDSTDILLVDVETKKADGTNETVTYSGKVSQKLRVKLGDKVVSGQKIFEG
PIILNQLLEAADTRAVQNYLLKEVQRLYRLQGITISDKYIEIIIRQMLSKIMITDPGDSK
FFTGSLVDTFVYQKENGKLLAQGKRPAFGEVKIRGAKQTPLLSDSFLAAASYQETAKILV
NSSIAKRVDYLEGLKENIILGHKIPAGTNSNYELKGKYDIRDPKSYFTDKIDPDTQTLEL
SEEQQDEINATFDDIEIPTSFDDDSLDMNPADEMDMNDDEENHEVFDIDDDVLEMSHDFD
ESEDE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttgataaagaacaagacgaattagttgaacaaattaataaaataactctc
tcacttgcaaccgacaaagacattttagaatgatcacatggtgaagttacaagacctgaa
acaattaactataaatcatatagaccagaaaaagatggtttatttgatgaattaattttt
gggccagttactgactacaaatgtcctatttgtaatacaaaatacaagaaaagtgatgaa
aactctgtatgtaccaaaacccctgcttgtgaaaaatatagacctgttattttacctaaa
attacacgtagaagcagaatgggacacatcaagttacacaacccagtggttcacttctga
ttcttcaaaattgatcactcaattatttcaaaacttcttgggcttagagttgctgattcg
acaaaacaagttacaaaagctgatttagaaaaattaatttactataaatcacatatcgta
cttgaatcaggtaacttaacaagcttaaagaaaaatacgattattgatattaatgaagct
gctgttatttatgaagccgcattagaagaaatgttaggtcactatgaacctgatacatat
gaatacgaagatatcgaaacagctttaatcgaattaagagaatatgctgaatcaaaaatt
ggaaaagattttggtattgacttctatcaatataatgaaattattcatgaatattcagat
gcaaaaattgacaccggttctcgtgcgatagaatatttattaacccatatcgatttagaa
aaagaagctcaatctgttcaagaagaaattgacaaaattaatgctgaaatggatgttgaa
gcaggtctgtcatctacaaaagatcaagatagatccaaattatataaacgtctaacagtt
attaactcatttattaaatcaggacaagatccaaaaagcatgttaatttataacttacct
gttatccctgctgatcttcgtccattagttcaattagatggtggacgtcactcaactagt
gatgttaacgaactttaccgtcgtattattattagaaacaaccgtttagctaaatgaaac
gaagcagatgctccgatgcttattaaacaaaatgagtatcgtatgattcaagaagcagtt
gatgctttaattgataatgcaagaaaaaaacctacaccagttgtatcaaaagattctcat
cctttaaaatctatttcagatgcgttaactggtaaaaaagggcgtttcagacaaaacctt
cttggaaaacgtgtcgactactcagggcgtagtgttatcgttgttggtccatcattaaga
atgcatgaagttggtattcctcgtgatatggctgctaaattattcgagccttgaattatt
aaagaaataattaaaggtgagccatcaattacaagtgttaaatcagctaagaaaaaaatc
gattcacttgacccaattatttgaccatatgttgaaaaagcaattgaaggtagacctgta
ttattaaaccgtgctcctacattacaccgtttatcaatccaagcattccagcctgtttta
attcgtggtaaagctattaaattacacccacttgtaacaacagcattcaatgctgacttc
gatggggaccaaatggctgttcacgttccaatttctgatcaagccgttagagaagccaaa
gaacttatgctagcttctaaaaacattcttggtccaaaagatggtgaacctattattaac
ccatctcaagatatgattcttggactatactacttaacaattgaaaaagctggacaaaaa
ggtgaaggaaacttctatggatcatttgatgaaatgatgctagcttatgaaaatggatat
atcacacttcacacaagagttgttcttcctgtttcagctttaaataaggaatctgtatct
aagtttacaaatgctccttatttagtatcgacagttggaaaattcatccttaataaagca
ttcccatctgattttgacttcatatttggtaaatatgtaacaagaaaagaagttatgcaa
gcagatggaactgctaaagtttctgaaagtgagaaaattgattattcagaaaaagactta
tacaaatatgtattgcaatatggagataactttgttgaaaaagttgctcaaatgcctgtg
aatttagctttagctaaaaaagatattgctaaaattgtacgtaaagtatatgaaaaatat
gtagcagtagttacattggaagatatagctaatattattaacgatactacacaagataat
tttgaagatagattctcttcatgtgctgaattagttgatttcgctaataatccgattcct
acttcacatgctagaataatttctaactcaatcaaagaacattttgaagctattaacttt
gaatgaactaagaaaaatatgcatgcagattatatgtctcatccagtttgaacattaaaa
gaatatacaaaggttcttgaaaatgtttgattcgactatactaactatgttgcttctatt
ttagatagagttaagaatttaggatttaaattttcaacaatatcaggaacaacaatatca
atgaacgatattacaacattaaatacaactgctgaaaagattaaaaaaggtgaggaatat
acagatcaacttaagaagttcttcgaagaaggatatttaactgatgatgaacgttataca
ttaacaattcaaaaatgatcagaagttaaagactcaatcgaaaaagatcttaaagaagtt
acaaagtctgatattgataacccattatttatgatgtttacctcaggagctcgtggtaac
tcatcaaactttacacagttagctggtatgcgtggacttatgaacaacaacaccaaagtt
cttaaagctgatgctgaaaacgaccgtgttgttcgttcaactgttgaaattcctgttaaa
tcatcattcctctcaggtcttacagcttatgaattctattcatcaacccacggggccaga
aaaggacttacagatactgctcttaacaccgctaaatctggatacctaacacgtagactt
gttgatgttgctcaaggaatcgtagttcgtcaagatgattgtggttctgactttggcttt
attgtaaaagatattaaagatacaaaaacagatacagttattgaatcattacaagaaaga
attgaaggaagatttactaacaaagcaattcttgatgaaaatggaaatgaattagttccg
gctaatactttaatcacacctgaattagcagataaaattgttaatgaatatggacaaaaa
caagttgaaattcgttcagtattatcatgtcatactaaaaatggtgtatgtaaacactgt
tacggtaaagatttagctacaaatagaattgtaaacattggtgaagctgtcggagtagtt
gctgcacaatcaattggggaacccggaactcagcttacaatgcgtacattccacaccgga
ggggttgctggggttgaagatattacaggtggatttggtcgtttaatcgagcttatcgat
gcttatgacttcccatgaggtaaacctgctgttatttcaactgtatatggtactgttgta
aatattgcaccagctaaagataaaaatggaaacgatagcacagacattttacttgttgat
gtagaaactaaaaaagctgatggaacaaatgaaactgttacatatagtggaaaagtatct
caaaaacttcgtgttaaattaggtgataaagtagtaagtggtcaaaagatctttgaaggt
ccaattatccttaaccaacttttagaagcagccgacacacgtgcggtacaaaattactta
ctaaaagaagttcaaagactataccgtttacaaggtattacaatttcagataaatatatc
gaaataatcattagacaaatgctttcaaaaattatgattactgatccgggagattctaaa
ttctttactggaagtcttgttgatacatttgtttatcaaaaagaaaacggaaaattactt
gctcaaggtaaacgtcctgctttcggagaagttaagattcgtggagcaaaacaaacgcct
ttattaagtgattctttcttagctgccgcctcataccaagaaacagctaaaattcttgtt
aactcatctattgctaaaagagttgattatctagaagggcttaaagaaaatattatttta
ggtcacaagattcctgctggaacaaactcaaattatgaattaaaaggaaaatacgatatt
cgtgatcctaaatcatactttacagataaaattgatccagatacacaaactcttgaatta
agtgaagaacaacaagatgaaatcaatgcaacatttgacgatatcgaaattcctacttca
tttgatgatgattcattagacatgaatccagcagatgaaatggatatgaatgatgatgaa
gaaaatcatgaagtatttgatatcgatgatgatgtattagaaatgtctcatgatttcgat
gaatctgaagatgaataa
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integrated database retrieval system
