Malassezia vespertilionis: 80899901
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Entry
80899901 CDS
T11699
Symbol
SKI2, MVES1_000394
Name
(RefSeq) Antiviral helicase ski2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mves Malassezia vespertilionis
Pathway
mves03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mves00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
80899901 (SKI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mves03019
]
80899901 (SKI2)
Enzymes [BR:
mves01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
80899901 (SKI2)
Messenger RNA biogenesis [BR:
mves03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
80899901 (SKI2)
mRNA degradation factors
3'-5' decay
Ski complex
80899901 (SKI2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4-like_stalk
ResIII
MTR4_beta-barrel
Helicase_C
DEXQc_Suv3
nSTAND3
Motif
Other DBs
NCBI-GeneID:
80899901
NCBI-ProteinID:
XP_056061229
LinkDB
All DBs
Position
1:complement(<705942..>709592)
Genome browser
AA seq
1216 aa
AA seq
DB search
MSLRPYERWDESLDELLRDFALVPEEDSVKCREEIKAKFLTPKWDLDNAWLAQAQLHWDR
EPDYENMLSMDPAPSTTSLQFIRSGLRGDVVGYREVISTDAIPELHDGEKLNMSMQRPVG
NTGSYVRGASDAVPFKPGGLEDDAVNQHGAHDVGEEPTNLRSVPPGFKHGLLDDMQDDGS
WNLNDSVAPLHESGSTDHTVITATADGLYRLPEEARAPESEDAVVDELLPVESIPRMFHG
VQVQPHQEKREWAHAVDATRQMTNFDTLVPYMAHQFPFELDTFQKQAVYHLERNESIFVA
AHTSAGKTVVAEYAIALAMKHLTRCIYTSPIKALSNQKFREFKHTFGADNVGILTGDVQI
NPEAPCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDQERGVVWEEVIILLPSHVN
IVLLSATVPNTMEFAGWVGRTKKKDVYVISTRKRPVPLEHFLYAGKNLHKVVDASGRFLS
SGVSTATDAMKSKQHLNDAPGTRGKAPVRGRSGTGRGARGGGIRRPMNQFHDKSLWVNLI
GVLRKNDLLPVVVFVFSKKKCEEYADSLPKTDLCSSKEKSEVHVIIERSLTRLKKVDHDL
PQILRTRDILSRGIGVHHGGLLPIMKELVEILFQRGLVKVLFATETFAMGVNMPARSVVF
SGTRKHDGTAFRELLPGEYTQMSGRAGRRGLDATGVVIVIPPDDGIDINMLNKMMLGQSS
KLQSQFRITYSMVLNLLRVEALKVEEMIKRSFSENSTQRLLPEQQKKLRDIETRLGALEV
ELKSCTIPLLDLERLYDASNSAVNRSETLIALAYHHSQGSKYLGTGRVVLLRDGFFNFTP
AFIVRQVVGEHFLVLAAMAPDERRAKPVRTDLVTPMWVSVELVNKMQTKDLVTEMREVPL
SSILFVTTYVETINAAAIYSRRASALRQALEQLRPVMDTMHAQLLEAGPNAAVAVTQFEA
DWAKLRRLDFQEAKQARDLVFQELIPLQAVIQAPHFLREYQLMHRRKGLEHQIACISASL
SDQNLDLLPDYHQRVDVLKALRFIDPVAETVLLKGRVACEIKSANELILTELILDNTFIE
YEPEEIAALLSVFHFHDKSSEEPKLPLRLAQGYEQIVEVADRVSAVQTANQLAAEDDANS
LKTGLMLVVYEWAKGTSFNDIMHLTSVGEGIIVRSITRLDETFREIRDASRVIGDMDLFQ
KMETCQQIIRYVSTTC
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgtccgtacgagcgatgggacgagtccctcgacgaattactacgcgacttt
gcacttgttcctgaagaagacagcgtcaagtgtcgcgaggaaatcaaggccaagtttctc
actccaaaatgggatttggacaacgcatggctagcacaggcgcagctacattgggatcgt
gagccggactatgaaaatatgctttctatggatccagctccaagcacaacctctttacaa
tttatccgctctgggttgcgcggcgatgttgttgggtaccgcgaggtgatctccaccgat
gccattcctgagctgcacgacggcgagaaactaaacatgtccatgcagcgccctgtaggg
aatacagggtcttacgtacgtggtgcttccgatgcggtacctttcaaacccggaggtctt
gaggacgatgccgtgaaccagcatggagcgcatgacgtgggcgaagaaccgacaaattta
cgcagcgttccccctggatttaagcatggtctcctagacgatatgcaagacgatggatct
tggaatttgaatgatagcgttgcaccactgcacgaaagcggctctacggaccacactgtc
attaccgctaccgccgatggcctctaccgcctgcccgaagaagcgcgtgcgccggagagt
gaggacgctgtggtagacgagttacttcccgtcgaatctattccgcgcatgtttcacggt
gttcaggttcagcctcaccaggagaaacgcgagtgggcacatgcggtcgacgcgaccagg
caaatgacgaatttcgacacactcgtcccctacatggcgcatcagtttccctttgagctg
gacacattccaaaaacaggctgtgtaccatctggagcgcaatgaatccatttttgtcgcc
gcacatacctcggcgggcaagaccgtcgtggctgaatatgccattgccttggcgatgaaa
cacttgacgcgctgtatttacacctcgcctatcaaagcgctttcgaaccaaaaattccgt
gagtttaagcacacatttggcgcggacaatgtaggcattctcaccggcgatgtgcaaatc
aaccccgaagcgccgtgtctgatcatgaccacggaaattctgcgaagcatgctgtaccgc
ggcgccgatttaatccgcgacgttgagtttgtaatttttgacgaagtgcactatgtcaat
gaccaggagcgtggtgtggtatgggaagaggtgatcatccttcttccttcgcacgtgaat
attgtactgctttccgcaaccgtgcccaacacgatggagtttgcggggtgggttggccgc
acaaaaaagaaggatgtgtatgtgatttccacacgcaaacgcccagtgccactcgagcac
tttttgtacgcgggcaaaaacttgcacaaggttgtggacgccagcggccgttttctctct
agtggcgttagcactgcgacggacgctatgaaatctaagcagcatctgaacgacgcacca
ggtacgcgtggaaaagctcccgtccggggccgtagcggcacaggtcgaggcgcacgcggt
ggcggaatacggcgtcccatgaaccagtttcacgacaagtctttgtgggtcaatcttata
ggtgtgctgcgcaaaaatgacttactacccgtcgtggtctttgtcttttccaagaagaaa
tgcgaagagtacgcggatagtttgcccaaaacggatctgtgctcgagcaaggaaaagagc
gaggtgcatgttattattgaacgaagcctcacgcgcttgaaaaaggtggatcacgacctg
ccgcagattttgcgcacgcgcgacattctgagtcgaggcattggtgtccaccacggtggt
ctgctcccaattatgaaagagctcgtcgagattctatttcagcgcgggctggtcaaagtt
ctctttgcgaccgaaacgtttgcaatgggagtcaacatgccggcgcgctcagttgtcttt
agcgggacgaggaagcacgacggcactgctttccgcgagctgctaccgggcgaatatacg
caaatgtcaggtcgtgcaggacgtcgtggcttggacgctaccggcgttgtgatcgtcatt
cctcccgacgatggcattgacatcaatatgctcaacaaaatgatgctcggccaatcgagc
aaactccagtcgcagttccgcattacgtacagcatggtgctcaacctcttgcgcgtcgag
gcactcaaagtcgaggaaatgattaagcgttccttttccgaaaattctacgcagcgcttg
ctccccgagcagcagaaaaaactgcgcgacatcgagacacgccttggtgcgctggaggtg
gagctgaaatcgtgcacgattcccttgctcgacttggagcgcttgtacgacgcatctaac
agtgctgtgaataggagcgaaacgctcattgcacttgcctaccatcattcacagggcagc
aaatatttgggcactggccgcgttgtgcttttgcgcgacggtttcttcaactttacgcca
gcctttattgtacgccaagtcgtcggcgagcactttttggtgcttgctgccatggcgcca
gacgagcgacgcgcgaaacctgtgcgcactgacctcgtcacccccatgtgggtatccgtg
gagctggtaaacaagatgcagacaaaagacctcgtcacagagatgcgcgaagtgccactt
tccagtattttgtttgtgacaacgtatgtcgagacaatcaatgcagctgccatctattca
cgccgtgcctctgcgctgcgccaagcgctggagcagctgcgcccggtgatggacacgatg
catgcacagctgctcgaagcgggacctaacgcagccgttgccgtgacgcaatttgaggcc
gactgggcgaagctgcggcgcctcgactttcaagaagccaaacaggcgcgcgatcttgtt
ttccaagagctcattcccttgcaagcagtgatccaagcgcctcattttctgcgcgaatac
cagctgatgcaccggcgcaaaggcttggagcaccaaattgcgtgcatcagcgcaagcctc
tcggatcagaatctggacttgctgcccgactaccaccaacgtgtggatgtgctcaaagcg
ctgcggtttattgatcctgttgcagaaacggttctgcttaaaggacgcgttgcgtgcgag
attaagagtgcgaatgagctgattctcaccgagctcatcctggacaatacattcattgag
tacgaacccgaagagattgctgcactcctgagtgtgtttcattttcacgacaagtcgtcc
gaagagcccaagcttcctctgcggcttgcacagggctacgaacagatcgtcgaggtggcc
gaccgcgtgtcggctgtgcagaccgcgaatcaacttgccgcggaagacgacgccaactca
ctcaagaccgggcttatgttggtcgtgtatgaatgggccaaaggcaccagctttaacgat
attatgcatctgaccagcgttggcgaaggtatcattgtgcgcagcatcacgcgcttggac
gagacgttccgcgaaattcgcgatgcctcgcgtgtgattggcgatatggatctgttccaa
aaaatggagacgtgtcagcaaattattcggtacgtatctacaacatgctaa
DBGET
integrated database retrieval system
