Malassezia vespertilionis: 80901195
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Entry
80901195 CDS
T11699
Symbol
PAT1, MVES1_001688
Name
(RefSeq) DNA topoisomerase 2-associated protein pat1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mves Malassezia vespertilionis
Pathway
mves03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mves00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
80901195 (PAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mves03019
]
80901195 (PAT1)
Messenger RNA biogenesis [BR:
mves03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
80901195 (PAT1)
mRNA degradation factors
5'-3' decay
Decapping complex
80901195 (PAT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
CobW_C
Trans_reg_dom
Motif
Other DBs
NCBI-GeneID:
80901195
NCBI-ProteinID:
XP_056062504
LinkDB
All DBs
Position
3:<405391..>407919
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AA seq
842 aa
AA seq
DB search
MSFFGFDTSLPPDAKSARTESDEESALNEKIQRALTASAQEDVEVYTWGESNCDGLGDKL
DEANDDFNEDTFGTFAENVSRDFDFGTGAAPTTQKSDKNASAFAASFDDFWSTPSLPVPH
SAQPLPKQPGAVRARTLEEIEAELRSKRPANPPPTSAWTQPTQPPNRAMTLEQVEAQLRA
QRAHKMPSASQHPHTKQDPPQAPMPPPSSQERPRESPVPAPAANQATHLTHMRALLEACP
PSFQSIILALPPPIQFDSLEEFAQRFPNVLRVPGALPLDAKDEQAAIQYLTSQATPRMQA
WQAAEEKQRLKAAKLANITRHNGLMSGADKDFITRIQISHLVSPDPYTDDFYAHVFFAVR
GGGRNVVLPDANTEEVIEQHKKGDEKRSSRRKLTRHENAMLRMQQQVERLVDSRKKREAR
GSTLEGALGRVSLVTANKPRQMLQLINDSDAVKQAHTESKPGDAEDAVRAALQGAHLNDA
AVRSDAQKRAALTQRETLVILERLYHTVLALEQLRRNPAAEHDYEIVQQQQQLTEKLWTE
LHVLDPLDISDPHPFVSLLNHVKGKRLLPRALRLLSPEQALTTLTMLIASFQSLDVVRDA
ALLEQYRAAQLVQQRSNLTVQQALDIQRSIAAFSQSVLYNMINLITDAPLRIVTGMLALL
MERNDVLFCAKTKLGTSLLTVLLSRAEALRQAASAAVASDNVPSADELDQWASVFGVLLN
RLSANDQLPALFPSTRIKMHLPFGVDLYMAGAFNIPLPGADKQFNLDTEDEPVWNLTALF
AIHSNLHQQQVLVQELRDKILSNILAANEARAKGLVADADMRVSNVNLLLHALNLDAAQI
TL
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctttggattcgacacttcgctgccgcccgatgccaaaagcgcacgcacggag
agtgacgaagaaagcgctttgaacgaaaagatccagcgtgcgctgactgcgagcgcccag
gaagatgtcgaagtgtacacgtggggcgaaagcaactgcgacggtctcggcgataagctc
gacgaggcgaacgacgactttaacgaggatacatttggcacatttgccgagaatgtaagc
agagactttgattttgggacgggcgccgcgccgacgacacaaaagagcgataagaacgct
tctgcctttgctgcgtcgtttgacgatttctggagcacgccgtcgctgcctgtgccgcac
agtgcccagccactccccaagcagcccggcgctgtgcgtgccaggacgctcgaggagatc
gaggccgagctgcgcagtaaacgccctgcgaatcccccgccgacatcggcgtggacgcag
cctacgcagcctccgaatcgtgccatgacgctggagcaagtcgaggcacaattgcgtgca
cagcgcgcgcataaaatgccaagcgcttcgcagcaccctcataccaagcaagatcctccg
caagcgcccatgccgcctccgagctcgcaagagcgtccacgtgagtcgcccgtgcctgct
cccgccgccaatcaagccacgcatcttacgcatatgcgtgcgcttcttgaagcatgcccg
ccgtcgttccaatccatcatcctcgcgctccctcccccgattcaattcgattctctcgaa
gagtttgcgcagcgattccccaacgtgcttcgcgtccctggtgctcttcccctcgacgcg
aaagacgagcaggccgccatccaatacctcacgagccaagccacgccgaggatgcaagca
tggcaagctgctgaggaaaagcagcgcttaaaagcggccaaacttgccaacattacgcgc
cacaatgggctcatgtccggtgcggacaaggactttatcacacgtatccagatcagccac
ctggtttcgcccgatccttacacggacgacttttatgcgcacgtcttctttgccgtccgg
ggcggcggccgcaacgttgtgctccccgacgccaacaccgaagaagtgattgagcagcac
aaaaaaggcgacgaaaagcgcagctcgcgccgcaaactgacgcgccacgagaatgcaatg
ctccgtatgcagcagcaagtcgagcggcttgtcgacagccgcaagaaacgcgaagcacgc
ggctccaccctcgagggcgcgctgggccgcgtaagtcttgtcacggccaacaagccgcgc
cagatgctccagctcatcaacgactcggacgctgtcaagcaggcacacaccgagagcaag
cccggcgacgctgaagacgcggtgcgcgcggcgctgcaaggcgcgcatctcaacgacgct
gcggtgcgctccgatgcgcagaagcgcgcggcgttgacgcagcgcgagacgcttgtcatc
ctcgagcgcctctaccacaccgtacttgctcttgagcagctccgccgcaatcccgccgcg
gagcacgactacgagatcgtccagcagcagcagcagctcaccgagaagctctggacggag
ctgcacgtcctcgaccctctcgacatttctgacccccacccttttgtctccctgctcaac
cacgtaaaaggcaagcgacttttgccgcgcgcgctgcgtctcttgtcgcccgagcaggct
cttaccacgctcacaatgctcattgcctctttccagtctttggacgttgtgcgcgacgct
gcgcttctcgagcagtaccgcgccgcgcagctagtccagcagcgcagcaacttgactgta
caacaagccttggatatccagcgtagcattgccgcgttttcgcagtcggtgctctataat
atgatcaacctgatcaccgacgcgccgcttcgtatcgttaccggcatgcttgctttgctt
atggagcgcaacgatgtgcttttctgtgccaagaccaaactgggcacgtcgctccttacc
gtcctcctctcgcgcgccgaggcgctgcgtcaggcagcctcggccgccgttgcgtcagac
aatgtgccgagcgccgacgagctcgaccagtgggccagcgtgtttggcgtcctgctcaac
aggctctcggccaacgaccagctcccggcgctctttccttccacgcgcatcaaaatgcac
ctgccgtttggcgttgatttgtacatggccggcgcattcaatatccctttgccgggcgcg
gataagcagttcaatttggacaccgaggacgagccggtgtggaacctgacggccctgttc
gcaatccattccaacctgcaccagcagcaggtcttggtccaggaactccgcgacaagatt
ctttcaaacattctcgcggccaacgaagcgcgggccaaggggctggtcgctgacgccgac
atgcgcgtcagcaacgtcaatctgctcctccacgcgctcaacttggacgctgcacaaatc
acactctag
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