Malassezia vespertilionis: 80902285
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Entry
80902285 CDS
T11699
Symbol
RLR1, MVES1_002778
Name
(RefSeq) THO2 plays a role in transcriptional elongation
KO
K12879
THO complex subunit 2
Organism
mves Malassezia vespertilionis
Pathway
mves03013
Nucleocytoplasmic transport
mves03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mves00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
80902285 (RLR1)
09122 Translation
03013 Nucleocytoplasmic transport
80902285 (RLR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mves03019
]
80902285 (RLR1)
03041 Spliceosome [BR:
mves03041
]
80902285 (RLR1)
Messenger RNA biogenesis [BR:
mves03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
80902285 (RLR1)
Spliceosome [BR:
mves03041
]
Complex C
Other components
EJC/TREX
80902285 (RLR1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
80902285 (RLR1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
LMNTD2_N
Motif
Other DBs
NCBI-GeneID:
80902285
NCBI-ProteinID:
XP_056063575
LinkDB
All DBs
Position
5:<658450..>663220
Genome browser
AA seq
1572 aa
AA seq
DB search
MQAQDDWLRAAACALEQGSDAEALRTQLESTFTSDARAVQRALIVLLRHAALEPIAPAPD
VLASIFTIHTPAFSDVLLDALWAVDWELDARQEVQSARDSDVDDVAWSGERVSLSSARAR
LAAILVAAVDHGVLDQTTTATRQDVPLLGAAGMVDPSIFQRRAIQIRTGRYFKQQKYNLL
REENEGYAALLAQVTAQRGPPIAAELETGASVWYDDARVAEQETDEAREERAVALLGRIA
ALIGYFRLDAARALDVVLAVFTTHVVHHYPFFLTLLQKSTWKSERIACVLGFQFAHYANQ
DTREPAPENLYFVAALLVRADLVSLDALMPYLAPAQGLESLKKRHDDALASNSSGAQNAL
AMAAPLEADGDAEGPTTPAAPAYVPPAQLVHVMRALLACGAIKLVAPIVCQHAWLFAAYP
SLMAAYVRIVKYMLQPAYDNIAMHTQAQGTSLGRALPPRLPHACAEQAPTLALTCCVPLP
QATLVRRFFFFVDDWARNVVRCNDVDAVVSIALPMLRPVGAQLYQDTELLQILCRFCAAY
MHMDLSLWLGVTRAMILPAISLAAPNPALLYALWSILEPLPYTERFRIYGEWKHRVYKRA
ELRACQKETEREARAILRRVSADNVRNMGRTLAKAAHPNPTVFFAVVLHQIQSYDNLIEP
VVDAAKYLTAVEYDILTFSLLEALSNPDKERTKSDGTNLSLWLKSLASFAGAFYKKYASV
NCTPLLQYLANRLVKEDTQDLVVLEELIQKMAGIEPIGELSELQIAALTGGFLLQQEAAL
TFIPKGVSAAPTSVLLARSAYKKGGAQLLRTLAASHLVLPILILIAQRRQACIFQEPDGD
AHIKSLGSTFDTCQEILFQYVHFLVSTMPLEDFARRLPPPQDLCKRFAIDAPIAFHITRP
KLVYEMRRLEKEEKSRAERKTSSECMDEALPEAEVEVKHSAETLAPNDDAVSEAQAANDN
TAREAMDESVDEAAAEPPIETPCWNLALTPVVETMAECLPEGAICALGAPFFVTFWQLSL
SDISVPMDRYQQEIARFRTWMREVDAAAELSENIKKSARNRLQDNITQLTAELKEQTLSY
QTTRRRLAHESRFFFPADVDKGLLVEQLVAQCLHPRALLSPIDAMFAARFLRLLHTNGTQ
HLPTLAVYDALFCQHVAQTLFLATENEARSYARFLAAILGDMHAWLRNEAAYNREAISER
VCGFALAWEGRRGIRQRDASTPLTWYAFRATVLRWHTSLSDAFIQCLQSDEYMRIRNAIV
VLNRVASFFPLYSEHGKALGGAVDSIAQKESRGDLKVLAQGLVATLNKHASAWTALDVFT
YVAPKKERKPSPPPKQKQKSSTAKAPKAALERAQPRPKPRKETPKESQAKDERRERHPAK
RREEESRREEPVSLRIRGSDTRQEPRYRDRGWGESRRDTHDGQERPSRYSDKETWSSRRD
ETPRGNAAWNRRRPEEARDSKETARRPEEAQSKEDERSRKRSLADRLGSNESGASAPSSP
ATDARDTKRARRVERPALQSTDTDRSWNDRERERDPPMRAWGRDKGDAVRDRRGDRDRDR
DRRKRRAGGDNA
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacaggacgactggctgcgcgccgccgcctgcgcacttgagcaaggcagcgat
gctgaagcactacgcacacagcttgagtccacatttacaagcgacgcgcgtgcagtgcaa
cgtgcacttattgtgctccttcggcacgcagcgctcgagcccatcgcgccggcacctgac
gtcctcgcatctatcttcacgattcatacccccgcgttctccgacgtgctcttggatgcg
ctctgggccgtggactgggaattggatgcacgccaagaagtacagtctgcgcgcgatagc
gacgtcgacgacgtagcgtggtccggcgagcgcgtttcattgagcagtgcgcgcgcgcgc
cttgccgccatccttgtagccgctgtcgaccacggcgtgttggaccaaacgaccactgcg
acgcggcaagatgtgccgcttcttggcgccgccggcatggtcgacccaagcatcttccag
cgccgcgcgatacagatccggacgggccgctactttaagcagcagaaatacaatcttctg
cgcgaagagaatgagggctacgcagcgctcttggcgcaggtcaccgcgcagcgtggcccg
cccatcgccgctgagctcgaaaccggcgcgtcggtatggtacgacgacgctcgtgtggcc
gagcaagaaacagacgaagcgcgcgaagaacgtgcggtagcgctcttgggacggattgct
gccttgatcggctactttcgcctcgatgccgcgcgtgcgttagatgtggtgctcgctgta
tttaccacccatgtcgtgcatcattaccccttcttcctcacgctcctgcaaaagtcgacg
tggaagtcagagcggattgcatgtgtgctgggcttccaatttgcacactacgcaaaccaa
gatacccgcgaacccgcaccagagaacctctattttgtcgccgcgctgcttgtgcgcgcc
gacctagtatcgctcgatgccttgatgccctaccttgcacccgcacaaggtctggagagt
ctaaaaaagcgccacgatgatgcgctggccagcaacagcagcggcgcgcaaaatgccttg
gccatggcggcgccgttggaggcggatggcgacgcagaagggccaaccacgcctgctgcg
ccagcgtatgtgcccccggcgcagctcgtgcatgtcatgcgcgctctgcttgcgtgtggc
gccatcaaactcgtagcgccgattgtgtgccagcatgcgtggctctttgcagcgtacccc
tcgctgatggcggcctacgtgcgcattgtcaagtacatgctccagcccgcgtacgacaac
attgcaatgcacacacaggcgcaaggcacaagcctcggccgtgccttgccgccgcggctg
ccgcatgcatgtgcggagcaggcgccaacgctggccctcacatgctgcgttcctcttccg
caagcgaccctcgtgcgccgtttcttctttttcgtcgacgactgggcgcgcaatgtggtg
cgatgcaacgatgtggacgccgttgtatctatcgcgctccctatgctgcgccctgttggc
gcgcagctataccaggacacagagctcttgcaaatcctgtgtcgcttctgtgccgcatac
atgcatatggacttgtccttgtggcttggcgtgacgcgcgccatgatccttcctgcaatt
tcgctcgcggcgccgaatcctgcgctcctctacgcactctggtccatcctggagcctctg
ccgtacacggagcgattccggatttatggcgagtggaaacacagggtgtacaagcgcgct
gaactgcgcgcgtgccagaaagaaacggagcgcgaagcgcgtgcgattttgcggcgtgta
agtgcagacaatgtgcggaacatgggccggacgctcgccaaggccgcccaccccaatccg
actgtgtttttcgcagtggtgctgcaccagatccagtcgtatgataacctgattgagcct
gtggtcgacgcggccaagtacttgaccgcggttgagtacgatatccttacattcagcttg
ctcgaggcgctcagcaacccagacaaggagcgcaccaagtcagacgggacgaatttgagc
ttgtggctcaagtcgctcgcgtcgtttgcgggtgcattttacaagaaatacgcctcggtg
aactgcacgccgcttttgcagtaccttgcgaaccgcctggtaaaagaggatacgcaggac
ttggtcgtgctcgaggagctgatccagaaaatggcgggaattgagccgatcggcgagctg
tccgagctgcaaattgcggcgcttacaggaggatttttgctccagcaagaggctgcgctc
acttttatccccaaaggggtttctgcagcgcccacgtcggtgttgctcgcgcgcagtgcg
tacaagaaaggaggtgcacagctgctgcgtacacttgcagcatcgcatctggtgcttccg
atcctgatcctcattgcgcagcggcgccaagcgtgcatatttcaggagccagacggtgac
gcgcacatcaagtcgttgggaagtacgtttgatacttgccaggagattttgtttcagtac
gtgcactttttggtgtcgacaatgccactcgaggactttgcgcggcgcttgccgccgccg
caggatttgtgcaagcgatttgcgatcgatgcgccgattgcgttccacataacgaggccc
aagctcgtgtatgagatgcgcaggttggagaaggaggagaagagcagggcggaaaggaag
acgagtagcgagtgtatggacgaagcgctaccagaggcagaagtagaggtgaagcattcc
gccgaaactttggcgccaaatgacgacgctgtgtcagaagcgcaggcggcaaacgataac
acggcgcgggaagcgatggacgagagtgtggatgaggccgccgcggaaccccctatcgaa
acgccctgctggaatttggcactaacgcccgtggtggaaacaatggccgaatgcctccct
gagggcgcaatttgcgcattgggcgcgccattctttgtcacgttctggcagcttagcctc
tcggacatttccgtgccgatggaccgctaccagcaggaaattgctcgcttccgcacttgg
atgcgcgaagttgacgcagctgccgagctatcggagaatatcaaaaaatccgcgcgcaac
cgcctgcaggacaacattacccagcttacagccgagctcaaagaacaaaccctttcgtac
caaacgacgcgccgccgccttgcacacgaatcgcgcttttttttccctgcggacgtggat
aaaggattgctggtcgaacagctggttgctcagtgcctgcatccacgcgcgctgctctcg
cccatcgatgccatgtttgccgctcgtttcctccgcttgctgcacacaaacggcacacag
catttaccgacgctcgcagtctacgacgcgctcttttgccagcatgtcgcgcaaacactc
ttccttgcgacggagaatgaagcgcgcagctacgcgcgtttccttgctgcgatcctcggc
gatatgcacgcatggctgcggaacgaagcggcgtacaaccgcgaggccatctcggaacgc
gtgtgcggattcgcactggcttgggaaggcaggcgcggaattcgtcagcgcgatgcatcg
acgccgcttacatggtatgcattccgcgctacggtcctgcggtggcacacttcgctttcc
gatgcattcatacagtgcttgcagtcggatgagtacatgcggatccgaaatgcgattgtc
gttttgaaccgcgtcgcgagttttttccccctgtacagcgagcacggcaaagcattggga
ggagccgtggattccattgcgcagaaagagtcgcgtggcgatctcaaggtgcttgcccaa
gggctcgttgccacgctcaataaacatgccagcgcttggacggcccttgacgtttttacg
tacgtcgcgcccaagaaagaacgcaaaccatcgccgccgccaaaacaaaaacaaaaatcg
agtacggccaaggcgcccaaagcggcactggaacgtgcacagcccaggcccaagcctcgc
aaggaaacgccaaaagagtcgcaagctaaggacgagcgccgcgaacgacatccagccaag
cgccgcgaggaggaaagccggcgcgaagagcccgtctcgttgcgtatccgcggcagcgac
acgaggcaggagcctaggtaccgggaccgtggatggggcgagtctcggcgcgatacacac
gatggtcaagagcgcccatcgcgctattcggacaaagagacatggtccagcaggcgcgac
gaaacaccgcgcggaaatgccgcttggaatcggcgccgccccgaagaggcacgcgactcc
aaagagacggcgcgtcggcctgaagaggcgcagtctaaagaagatgagcgctcgcgcaag
cgctccttggcagaccgcctgggcagcaacgagagcggcgcaagtgccccaagttctcct
gccaccgatgcccgcgacacgaaacgtgcacggcgcgtcgagcggccagcactccagtct
acggacactgaccgcagctggaacgaccgcgaacgggagcgggatccgccgatgcgcgct
tggggaagagacaagggcgacgctgtgcgcgatcgtcgaggcgaccgcgatcgcgaccgc
gaccgtcggaaacgccgtgctgggggagataacgcgtga
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