Malassezia vespertilionis: 80902593
Help
Entry
80902593 CDS
T11699
Symbol
CLP1, MVES1_003086
Name
(RefSeq) polynucleotide 5'-hydroxyl-kinase
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mves Malassezia vespertilionis
Pathway
mves03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mves00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
80902593 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mves03019
]
80902593 (CLP1)
Enzymes [BR:
mves01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
80902593 (CLP1)
Messenger RNA biogenesis [BR:
mves03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
80902593 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
AAA_28
SRPRB
Pro_CA
Motif
Other DBs
NCBI-GeneID:
80902593
NCBI-ProteinID:
XP_056063877
LinkDB
All DBs
Position
6:complement(<390923..>392617)
Genome browser
AA seq
564 aa
AA seq
DB search
MESRARRIRLPPRAEYRFELEAGEVLSMRFVQDAISGHYGDAEVFGAPLVGGAQERWYTF
GNEAKAAISSWGGAEIEIVGTASTEYMADEPSPLYTYGANLHLAAERARIRAREQLRTGK
SLIDSLAAQDVATRTEPPSYENMNVSSPSEFYRAAGQGPRIMVVGPESAGKTSLIKFLAN
YALRSPAIASVEEGQDAQILSRAAPDEEEEEGEEEEQVKPDEAKVMGDITGWWPMVLNLD
PNAGAVPVPGCISAIPLSPTPMNCLPSPSPALPYGVTLQTSGALPPAASTVESVVPLVQW
LGKENVRENEAHSHRVVDWLAHSVEKRLVKDLRARMSGLLLDMPGVVTGDSRTRYSFIQY
CVRAFKVDVLVVLGHEKLNLELTKIFSANADAPQIVKVPKSGGAVDVDDLYKQKVQDLQI
RSYFYGMGVPKPQESGLANEDGAPHENSHVFPSHMEPLGGVPTLNPYSFTIPLDLLEIYR
VGQDRIAPSSALPIGAERAMDGLQVVKLDPVNSASDLSSLLHSVLVLVEPPRGGGEPGKP
DSECERTEDELLGASLVGLVHVYV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaagggcgcgccgtatccgccttccgccgcgcgccgaataccggtttgagctg
gaagctggcgaggtgctgtctatgcgctttgtgcaggacgcaatttcgggccactatggc
gatgcagaagtgtttggcgcgccattggtcggaggcgcacaggaacgttggtatacgttt
ggcaacgaggcgaaggctgcgatctcgtcgtggggcggggctgagattgagattgtaggg
actgcatcgactgagtacatggcagacgagccttcacccttgtatacctacggcgcaaac
ttgcacttggccgcggaacgcgcaaggatccgagcgcgggagcaattacgcacaggcaag
tcgttgatcgactcccttgctgcgcaggatgtggccacacgcacagaaccaccctcatat
gaaaacatgaacgtgtcatcgccatcggaattctatcgtgcggcgggccaaggaccgcgg
attatggtggttggcccggagagtgcgggcaagacgagcttgatcaagtttctcgctaat
tatgcgctccgctcaccggctatagcaagtgtggaagaaggacaagatgcacagattttg
tcgcgcgctgcgccagacgaagaggaagaagagggggaagaggaagaacaggtaaagcct
gacgaagccaaggtgatgggcgacattacaggatggtggcccatggtcctcaatttggat
ccaaatgcaggtgcagtgcctgtgcccggatgcatttctgcgattccactgtcgcccaca
ccaatgaactgccttccttcgccgtcgcccgcgctgccgtacggcgtgacgttacagacc
tctggcgccttgccaccggccgcgtccacagttgagagcgtagtaccgcttgtgcagtgg
ctcggtaaggagaatgtgcgcgagaacgaggcgcattcgcaccgagtggttgattggctt
gctcactctgtggagaagcggctcgtgaaagatttgcgcgcgcgcatgtcgggccttctg
cttgatatgccgggtgtagtcactggtgactcgcgcacacgctactcctttatccagtac
tgcgtgcgtgcgttcaaggtcgacgtacttgttgtgctgggccacgaaaagctcaatttg
gaactgaccaagattttctccgccaacgccgacgcgccgcagattgtcaaagtacccaag
tctggcggcgctgtcgacgtggacgacttgtacaaacaaaaggtgcaggacttgcaaata
cgctcctacttctacggcatgggtgtgcccaagccccaagagtcgggcctcgccaacgag
gacggcgcgccgcacgagaacagccacgtttttccttcccacatggagcctctgggcggc
gtgcctacgctgaacccatactcttttacgattcctcttgatcttctggagatttacaga
gtcggccaggacagaattgcgccttcatcagcactgcctattggcgcagagcgtgccatg
gacggactgcaagtggttaagctggacccggtgaattctgcatcggacctctcctcactc
ctacactcggtgcttgttcttgtcgagccaccgcgcggcggaggcgagcccggcaagccg
gattccgagtgcgagcgcaccgaggatgagctgctaggagcgagcttggttggactcgtg
catgtgtacgtatga
DBGET
integrated database retrieval system
