Malassezia vespertilionis: 80903407
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Entry
80903407 CDS
T11699
Symbol
SUB2, MVES1_003896
Name
(RefSeq) RNA helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mves Malassezia vespertilionis
Pathway
mves03013
Nucleocytoplasmic transport
mves03015
mRNA surveillance pathway
mves03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mves00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
80903407 (SUB2)
09122 Translation
03013 Nucleocytoplasmic transport
80903407 (SUB2)
03015 mRNA surveillance pathway
80903407 (SUB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mves03019
]
80903407 (SUB2)
03041 Spliceosome [BR:
mves03041
]
80903407 (SUB2)
Enzymes [BR:
mves01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
80903407 (SUB2)
Messenger RNA biogenesis [BR:
mves03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
80903407 (SUB2)
Spliceosome [BR:
mves03041
]
Complex C
Other components
EJC/TREX
80903407 (SUB2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
80903407 (SUB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_19
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
80903407
NCBI-ProteinID:
XP_056064681
UniProt:
A0A2N1J7N1
LinkDB
All DBs
Position
9:complement(<211790..>213076)
Genome browser
AA seq
428 aa
AA seq
DB search
MENEDLIDYEEEVSVPTTAPAEGAPAAASGEEKDKKGSYVGIHSTGFRDFLLKPELLRAI
SDLGFEHPSEVQQECIPQSILGMDVLCQAKSGMGKTAVFVLATLQQIEPVDGEVSVLVLC
HTRELAYQIRNEYSRFTKYMPNVRTGVVYGGTPIREDQAMLADKTKCPHILVGTPGRMNA
LVRDKNLKVGEVKHFVVDECDKILDNLDMRRDVQEIFRATPHHKQVMMFSATLAKEARDV
CKKFMQNPLEIYVDDETKLTLHGLQQYFVRLDEAAKNRKLNDLLDNLEFNQVIIFVKSVA
RANQLDKLLRESNFPSISIHGGLPQDERIKRYQQFKNFEKRILVATDIFGRGIDVERVNV
SISYDTPSDADSYLHRVGRAGRFGTKGLAITFVSSDEDAEVLKQIQSRFEVAIPELPENI
EASSYMNA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaggatttgattgattacgaggaggaagtgtcggtgcccaccacggctccg
gcggagggtgcacctgcagcggcttccggtgaagagaaagacaagaagggcagctacgtg
ggtatccactctacgggttttcgtgactttttgctgaagccagagctgctgcgtgccatc
agtgacctcggtttcgagcacccgtctgaggtgcagcaggagtgcattccgcagtcgatc
cttggtatggacgtactgtgtcaggccaagtccggtatgggtaagactgccgtgtttgtg
ctcgctacgctccagcagattgagcccgtcgatggcgaggtgtctgtgcttgtgctttgc
cacactcgtgagcttgcataccaaatcaggaatgaatactctcgtttcactaagtacatg
ccaaacgtgcgcacgggtgttgtgtacggcggcacgccgattcgcgaggaccaagcgatg
cttgcagacaagaccaagtgcccgcacattctcgtcggcacgcctggtcgtatgaacgcg
cttgtgcgtgacaagaatcttaaggttggcgaagtgaagcattttgttgtcgacgaatgc
gacaaaattctcgataacctcgacatgcgccgcgacgtgcaggaaattttccgtgccacg
ccgcaccacaaacaagtaatgatgttcagtgctacgctcgccaaggaggcgcgtgatgta
tgcaagaagtttatgcagaaccccctcgagatctacgtggacgacgagacgaagctcacg
ctgcacggtctccagcagtactttgtgcgtctcgacgaggcggcaaagaaccgcaaactg
aacgatcttttggacaacctcgagttcaaccaggtaattatttttgtcaagtctgttgct
cgtgcgaaccagcttgacaagctgctccgcgagagcaactttccctccatctcgatccac
ggtggtctcccccaagacgagcgcatcaagcgttaccagcagttcaaaaactttgagaag
cgtatcctggtcgcgactgatatctttggtcgcggtatcgatgtcgagcgtgtcaacgtc
tctatcagttacgatacgccctctgacgcagattcgtatttgcaccgcgttggtcgggct
ggtcgctttggtaccaagggtcttgccatcacgtttgtgtccagtgatgaagatgcagag
gtgctcaagcagatccagagccgcttcgaggtcgctatcccggagctgcccgagaacatc
gaggctagctcttacatgaatgcatag
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