Moraxella veridica: ACE1C5_07355
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Entry
ACE1C5_07355 CDS
T11071
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mvf Moraxella veridica
Pathway
mvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE1C5_07355 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvf03019
]
ACE1C5_07355 (rnr)
03016 Transfer RNA biogenesis [BR:
mvf03016
]
ACE1C5_07355 (rnr)
Enzymes [BR:
mvf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ACE1C5_07355 (rnr)
Messenger RNA biogenesis [BR:
mvf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACE1C5_07355 (rnr)
Transfer RNA biogenesis [BR:
mvf03016
]
Prokaryotic type
tRNA degradation factors
ACE1C5_07355 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
Motif
Other DBs
NCBI-ProteinID:
XKC35398
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All DBs
Position
1592068..1594368
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AA seq
766 aa
AA seq
DB search
MTSKTKKTKWNDPKAEIEASKYQNPIPSRLLILQTVADITNQGNPATQESLAMHFGFLDD
EDRFFALTNRLKAMLRDGQLERIDGIHFSVAPLPTLLTGKVSCNPKGFGFVVLDDMPDLF
LHEKQMRLVFDGDTVEAVATEYRGKAEARITQVLERSQLEFIGKLSSDDEGYFVQLSGAN
AHQPITVTTENVEEMNAGVGDDVKVSLIDLPTYQEFATGKITELLTSLNDRELIIETTLY
NYAIPHEFSPAALKQAASFDEPTQKDFDHRVDLRHLPLVTIDGEDSRDFDDAVYAEKRAG
GNYRVIVAIADVSHYVTPGSPLDQDAYERGTSVYFPHCVIPMLPEALSNGLCSLNPKVDR
LCMVADIKLSRAGKVTGYEFYPAAMHSQARLTYNQVNAYFNDPTNETLPDELVRNGAVLK
SIDTLHQLYGVLDARREDRGAMAFETAETYIKFGKDGDIIDIVARTRGDAHKLIEEMMLL
ANTCAANLALKHELPVLYRNHDKPNDEKSARLHEYVKSFGLSFPSEAPTHEDYQRIIKAT
ADRPDAISIHSMLLRSMMQANYSPDNIGHFGLAYDEYSHFTSPIRRYPDLMLHRAIKDKV
TNQKPEATIYKTLDDAGEQTSMTERRAEEASRDVETWLKCHYMQRHIGDEFGATVTTVTN
FGLFVTLNDLFIEGLIHISQLGNEYFAYDEREQKLIGERGSRFGLGDGLIIQVAGVNMDL
LQIDFRLVEHLNRIDKNGDNQTVPPKPTNDKSDKNSKPKKSRQKSK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaaaacaaaaaaaaccaaatggaatgaccccaaagctgaaatcgaagcatca
aagtatcaaaaccccatcccctctcgcctgctgatcttgcagacggtagcggatatcacc
aatcaaggcaatcctgccacccaagagtcgcttgccatgcactttggatttttggatgac
gaagatcgattttttgctctcaccaatcgtctcaaagccatgctgcgcgatgggcagctt
gagcgtatcgatggcattcattttagcgtcgcgccgctgccaaccctattaacaggcaaa
gtgtcttgcaatcccaaaggtttcggcttcgtggtgcttgatgatatgccagatttattc
ttacatgaaaagcagatgcgccttgtgtttgatggcgatactgttgaagcggtcgcaacg
gaataccgcggaaaggctgaggctcgcattactcaagtgcttgagcgtagtcagcttgag
tttatcggtaaattaagctcggatgatgaaggttattttgtgcaattatcaggtgctaac
gcgcatcagcccatcaccgtcaccaccgagaatgtcgaagagatgaatgcaggcgttggc
gatgatgtcaaagtatctttgattgatctgcctacctatcaggagtttgccacaggtaaa
attaccgaacttttgaccagtctgaatgaccgcgaactgatcattgagacgacgctgtat
aattatgccattccacatgagtttagccctgccgccttaaagcaagccgcaagttttgat
gaacccacccaaaaagactttgatcatcgcgtggatctgcgccatctgccattggtaacc
attgatggtgaagactctcgcgattttgatgacgctgtctatgccgaaaaacgcgccggc
ggtaactatcgtgtcattgtcgccattgctgatgtcagccactatgtcactcctgggtcg
ccattggatcaagatgcctatgagcgcggtacttcggtatattttccgcactgcgtgatt
ccgatgctgcccgaagcgctatcaaatgggctttgttcactcaatcccaaggtagaccgc
ttatgcatggtagcggatattaagctgtcacgcgcaggcaaggtgactggctatgaattc
tatcctgccgccatgcactcacaagctcgattgacttataatcaagttaatgcgtatttt
aatgacccaaccaatgaaaccctgccagatgagctggtgcgcaatggtgcggtgctcaaa
tccattgacacgctgcaccagctttatggcgtgcttgatgcgcgccgtgaagatcgcggg
gcgatggcatttgagacggcggagacttatattaaatttggcaaagatggcgacatcatc
gacatcgtggcacgcacccgaggcgatgcacataagctcatcgaggagatgatgctactt
gccaatacttgcgccgctaatctggcactcaagcatgaattacccgttttgtatcgcaat
catgataagcctaatgatgaaaaatcagcacggctacatgaatatgttaaaagctttggg
ctaagcttccctagtgaagcaccaacgcacgaagactatcagcgcatcatcaaagcaacc
gccgatcgtcctgatgccatcagtatccacagtatgctactgcgctcgatgatgcaagca
aattatagtcctgataatattgggcattttggcttagcgtatgatgaatacagccatttc
accagtccaatccgccgttatccagacttgatgctgcaccgcgccatcaaagacaaagtc
acaaatcaaaaacctgaagcgacgatttataaaaccttagacgacgctggcgaacaaacc
agcatgaccgaacgccgtgccgaagaagcatctcgcgatgtcgaaacttggctaaaatgc
cactacatgcagcgccacatcggcgatgaatttggcgcaacggtgacgacggtaactaat
tttggcttatttgtcacgctaaatgacttgtttatcgaaggcttaatccacatctcgcag
ctgggcaatgagtactttgcttatgatgagcgcgaacaaaagcttatcggtgaacgaggc
tcaagatttgggctgggtgatgggctgatcattcaggttgcaggcgttaatatggatttg
ctacaaattgattttcgcttggttgagcacctaaatcgcattgataaaaatggcgacaat
caaacggtgccccctaagcctaccaatgacaaatcagacaaaaatagcaagcccaaaaag
tctcgccaaaagtcaaagtaa
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