Moraxella veridica: ACE1C5_08470
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Entry
ACE1C5_08470 CDS
T11071
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mvf Moraxella veridica
Pathway
mvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE1C5_08470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvf03019
]
ACE1C5_08470
03009 Ribosome biogenesis [BR:
mvf03009
]
ACE1C5_08470
Enzymes [BR:
mvf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACE1C5_08470
Messenger RNA biogenesis [BR:
mvf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACE1C5_08470
Ribosome biogenesis [BR:
mvf03009
]
Prokaryotic type
rRNA processing factors
ACE1C5_08470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
XKC35599
LinkDB
All DBs
Position
1796800..1800420
Genome browser
AA seq
1206 aa
AA seq
DB search
MKRILINATHNEEIRVALCKDNHLYDFDLENRTREQKKANIYKGHITRVEPSLEAAFVEY
GSARQGFLPLREIAPEYLNGNAREDSIKQLIKEGDEVIVQVEKEERGNKGAALSTFISLA
GRYLVLMPNNAKAGGISRQISGKVREEMKQIIAGLSLPKGMSVIVRTAGLGKGAVDLQND
LDHLLDIWKSIQDQNKNRPSPCLVHQEAGVVTRAVRDYLRDDIGEVWIDSENAYDEAANF
IKAVMPAQMSKLRKYTDYEPMFARFGIERQIETAYQREVRLPSGGSIVIDQTEALVSIDI
NSSKSTKGSDVAETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMNDPRHQKDVEKRLI
EATRHDRARVQFAEISKFGLMEMSRQRLRPSLEEATGYICPRCHGNGMIRDLRSLSLSIM
RQIEQIALKERMGEIQAEVPTDIAAFLLNEKRESLVYLEQDSGARITILPHAHLESPNFS
LHFNPDGFAPSSYERIADTEEKENIDRGYEVNWQTEYEKQDSNRWQKSEPKPTQKAPAAE
PKPAAKAEPQAVAWLSNLFAPKPQAKVAGSLGTADAASAIEALVNGGAVSLGAAGIMADI
PAPTAESNARPQAEDKRHKKPRNAKKESVEETTAQAPEKADKKTKKERDKEHYPKREAGS
RRESRGEIVRGETLHKAEEKVEKTEKAEKPVRADKPKSEKADKPPRQKAANPEDVVLHVS
SIKAAENNAQVIHLSLDGSKSAKPSKDEPSNTKDDVKDDVKATPQTYADKAIKAQKEPMP
VKPKPDEVEPATQPDEIGTPTTVSSTEGIEPKLAEKIQALAKSMNKAANDPRVVQIALRQ
TQAVNLNGMTAGALILRILGESATGNFVTDFMNAVAKMSAPSQFDFANFGYSPLDAAAKD
EFGKLTQATAQASAPQGKTKTEPRPITRRAANDPRGQHPEYVEETSTGNEPAIETVLQDA
DQAACTVSDSDIAPAQAVAQVTETAESRLEDIADDRSADNQSAQVIIDTKASDEASKPAT
ASAPDSDDSQLSEAVEAVEHLIDDAIDATALAAEQISDSIGDTVSETMANISTVVSATAD
LLLPDMADDAATEAEEDGHEQDEPENGKAKKGSQIKEITANQKTERKTKANSYKDMIENV
AGQLQPQVGILNLMAAKPAKAPKPTKTRAPRKPSKKPTKVEVRKLSKPVEPSELPSAESA
DDSANN
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatattaattaacgccacgcataacgaagagattcgtgttgcgctctgtaaa
gacaatcatctatacgacttcgaccttgaaaatcgtactcgtgaacaaaaaaaagcgaac
atctacaaagggcacattacccgtgtagagccttctttggaagctgcgtttgttgagtat
ggctcagcgcgccaaggctttttaccgcttcgagaaattgctcctgaatacctaaacggc
aatgcgcgcgaagatagcattaagcagctcatcaaagaaggcgatgaagtcatcgttcaa
gtcgaaaaagaagagcgcggcaacaaaggcgcggcgctctcaacatttatctcattggcg
ggtagatatttggttttgatgccaaataatgccaaagcaggcggtatcagccgccaaatc
tcaggcaaagtccgtgaagagatgaagcaaatcatcgcaggtcttagcctaccaaaaggc
atgagcgtcatcgttcgtaccgcaggtttgggcaaaggtgctgtcgaccttcaaaatgac
cttgatcatctgttagacatttggaaatccatccaagaccaaaacaaaaaccgcccaagt
ccttgcttggtgcatcaagaagccggcgtggtcacacgtgcggtgcgcgattatctgcgt
gatgacattggcgaagtatggattgacagcgaaaatgcttatgatgaagcggcaaatttt
atcaaagccgtgatgccagctcaaatgagcaaactgcgtaaatacaccgactatgagccg
atgtttgcgcgttttggtattgagcgtcaaatcgaaactgcttatcagcgcgaagtgcgc
ttgccttctggtggctcaatcgtcatcgatcagaccgaagctttggtatccattgacatc
aactcatcaaaatctaccaaaggctcagacgtcgccgaaaccgcctaccacaccaattta
gaagctgccgatgaaatcgctcgccagctgcgcctaagagacatgggcggcttgattgtc
attgactttattgacatgaatgatccgcgccaccaaaaagacgtcgaaaaacgactcatc
gaagcgacgcgccatgaccgtgcgcgtgttcaatttgccgagatcagcaaatttggtctg
atggagatgagccgccagcgcctgcgtccatcactagaagaagccacaggttatatctgc
ccacgctgtcatggtaatggcatgattcgtgatttgcgctctttgtcgctgtccatcatg
cgtcaaattgaacaaatcgccctaaaagagcgcatgggcgaaatccaagccgaagtgcca
accgacatcgctgcttttttattaaacgaaaaacgtgaaagcttggtatatcttgagcaa
gacagcggcgcacgcatcaccattttgccgcacgcgcatcttgaaagccctaactttagc
ttgcactttaatccagatggttttgcgccatcaagctatgagcgcatcgcggacaccgaa
gaaaaagaaaatattgatcgcggctatgaagtcaactggcaaacagagtacgaaaaacaa
gactcaaaccgctggcagaaatccgaaccaaagcctacccaaaaagcccctgctgccgag
ccaaaaccagcagccaaagctgaacctcaagcagtggcatggctgtccaatctgttcgca
ccaaagccacaagccaaagttgctggcagcttagggacggcagatgctgcttctgctatc
gaagcattggtaaacggcggcgcagtaagcctaggcgcagcgggcatcatggcagatatc
ccagcaccgacagcggaatcaaatgcacgccctcaagcagaagacaagcgccataaaaag
cctcgaaatgccaagaaggaatcggtcgaagaaaccactgcccaagcccctgaaaaagcg
gacaaaaaaaccaaaaaagaacgcgataaagaacactatccaaagcgtgaagcaggttct
cgccgtgagtctcgtggagagatcgtgcgcggtgagacgcttcataaagccgaagaaaaa
gtagaaaaaacagagaaggctgagaagccagttcgtgctgacaagcctaaatctgaaaaa
gccgataagccgccacgtcaaaaagcggccaatcctgaagatgtggtgctacatgtaagc
agcatcaaagccgctgaaaataatgcgcaagtcatacatctttcgctagatggcagcaag
tcagcaaaaccatccaaagacgagccgtcgaacaccaaagacgacgttaaagacgatgtc
aaagctacacctcaaacttatgcagacaaagcgatcaaagcgcaaaaagagcccatgcct
gtcaagcccaagccagatgaagttgagccggctacacagccagacgagatcggcacgcca
actacagtctcatccactgaaggcattgagccgaaactggctgaaaaaattcaggcgctt
gccaaatcgatgaataaggctgccaatgaccctcgagtggtacaaatcgcccttcggcaa
acccaggctgtcaatcttaatgggatgacagcaggagcgcttatcttgcgcatcttaggt
gagtctgccacaggcaattttgtgactgattttatgaatgcagtggcaaagatgtcagca
ccttcacaatttgattttgctaactttggttactcaccactggatgccgctgcaaaagat
gagtttggcaaattgacccaagccaccgctcaagcctcggctccacagggtaaaactaag
accgagccgcgcccaattacgcgacgcgctgccaacgaccctcgcggtcagcatcctgag
tatgtcgaagagaccagcactggcaatgagccggcgatcgaaactgttttacaggatgcc
gatcaagccgcctgtactgtctcggacagcgatatcgccccagcccaagcagtcgcccaa
gtgacggaaactgccgaatctcgactagaggatattgctgatgaccgcagtgcagataac
caaagcgcgcaggtgatcatcgacactaaagcgtcggatgaggcatccaaaccggctacc
gcgtctgcacctgactcggatgacagccagcttagcgaagcggttgaagcagttgaacat
ctgatcgatgatgccatcgatgccactgcgcttgctgcagaacaaatctctgacagcatt
ggtgacaccgtcagcgagacgatggctaatatctcaaccgtcgtctcagcgactgcagat
cttcttctgcctgatatggctgatgacgccgctacagaagcggaggaagatggtcatgag
caggacgaacctgaaaatggcaaagccaaaaaaggcagccaaatcaaagagatcaccgct
aaccaaaaaacagagcgcaagaccaaagcaaatagctacaaagacatgattgaaaatgtc
gcaggtcagctacaacctcaggttggcatcttaaatctgatggcagccaagcctgccaaa
gcgcccaagccaaccaaaacgagagcgcctagaaagccaagcaaaaaaccaactaaggta
gaagtgcgcaagctatctaaacctgtggagccctcggagttgccatctgctgaatcggca
gatgattcagccaacaactga
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