Mannheimia varigena USDA-ARS-USMARC-1312: X874_10740
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Entry
X874_10740 CDS
T03028
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvg03016
]
X874_10740
Enzymes [BR:
mvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
X874_10740
Transfer RNA biogenesis [BR:
mvg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
X874_10740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF2274
TRAM
Hemolysin_N
Motif
Other DBs
NCBI-ProteinID:
AHG77710
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All DBs
Position
1153715..1155694
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AA seq
659 aa
AA seq
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MFQNNPLLAQLKQQIEANKEYVEGRVKASDKSFGFLECDKEESFFIPPTEMKKVMHGDTV
KAVVKREGDKASVEIDSLIEPMLERFIAQVRYNKEGKLQLAVDHPSIKQNLPANTHKKVT
ETLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAPWWVTLARHEQPREPVANEK
SYELHDELEREDLTHLYFTTIDSPSTQDMDDALFVEPIEKNGLQAGWRLVVAIADPTAYI
PENSNIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGFIETDLEGNLT
KEANFTLAWVESKDRLAYDNVSDYLENVENAWQPQSAETKQQIDWLHQFTQARIQWRAKN
ALLFKEQGDYKFELNEDGSVKDIHVEYRRIANQMIEESMILANICCAKFLSENAKTGVFN
THSGFDSKNYELVKSFLLQTLATDENREALAERYSAERLMTLDGYCEMQRDIQDFPERFL
ELRLRRYLTFAEFKAEVAPHFGLGISHYATWTSPIRKYGDMVNHRLIKQVLLGKQASAVE
ESVLTRLQEARRQNRLVERDIADWLYAHYLFPMVEQAVEFECEIADVSRGGLRAKVINNG
AQIFVPFSTLHDNKDEMDYRQEELALYIKGEKAYQIGQEVKVKLTEVRVETRSIVGNII
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaacaatccccttttagcccagctaaagcaacaaatcgaagcgaataaagag
tatgtggaaggaagagtaaaagcctccgataaatctttcggctttttagaatgtgataaa
gaagaaagctttttcattccacctacggaaatgaaaaaagtgatgcacggcgacaccgtg
aaagcggtggtaaaacgtgagggcgacaaagcctcggtggaaatcgacagcttaattgag
ccgatgctagaacgttttatcgcccaagtgcgttacaacaaagaaggcaaattgcaactg
gcggtagatcacccaagcattaagcaaaacctgcctgccaacacgcataaaaaagtgact
gaaaccttagaaaatggcgactgggttgtggctcaactgaaaacgcacccattgcgtgat
gaccgttttttcttcgctcaagtaactcaatttatctgtaaagagagcgacaatttcgct
ccgtggtgggtaacactcgctcgccacgaacagcctcgtgagccagtggctaacgaaaaa
agctacgaattgcacgatgagctagagcgtgaagatttaacccatctctacttcaccact
atcgacagccctagcacgcaagatatggacgatgccttgtttgttgagccaatcgaaaaa
aacggcttacaagccggctggcgtttagtggtggcgattgccgatccaaccgcttatatt
cctgaaaattccaatatcgaaaaagccgctcgccaacgttgtttcaccaactatttgccg
ggatttaacattccaatgttgcctcgtgaactgtcagacgacctctgctcgcttgtgcca
aatgaaaaacgccctgctctcgtgggctttattgaaactgacctagagggcaatttaacc
aaagaggcgaatttcactttagcgtgggtggaatcaaaagatcgtttggcttacgacaac
gtgtctgactatcttgaaaacgtggaaaatgcgtggcagccgcaatcagcagaaaccaaa
cagcagatcgactggctacaccaattcacccaggctcgtattcaatggcgagcaaaaaat
gcgttgcttttcaaagagcaaggagattataaatttgagttaaacgaagatggttcggtg
aaagatattcacgttgaataccgccgcattgctaaccaaatgattgaagagtcgatgatc
ctcgctaatatttgttgtgcaaaattcttgtcggaaaatgccaaaaccggcgtattcaac
acgcactcaggttttgatagcaaaaattacgagttagtgaaatcgttcttactccaaacc
ttagctaccgatgaaaaccgtgaagccttggcagaacgttattcggctgaacgcttgatg
accttagacggctactgcgaaatgcaacgtgatattcaagatttcccagaaagattcttg
gaactccgccttcgccgttacttaactttcgctgaatttaaagcagaagttgccccacat
tttggcttaggtattagccactatgcgacttggacatcgccaatccgtaaatatggcgat
atggtaaaccaccgcttaatcaagcaagtgttgctaggcaaacaagcctcagctgtagaa
gaaagcgtactcactcgcttgcaagaagcccgccgccaaaatcgcttggtggaacgtgat
attgccgactggctctacgcccactacctattcccaatggtggaacaagcggtcgaattt
gagtgcgaaattgcagatgtatctcgtggtggcttgcgtgcaaaagtgattaacaacgga
gctcaaattttcgtaccattctcaactttacacgacaacaaagacgaaatggactaccgc
caagaagagctagctctttacatcaaaggcgaaaaggcctaccaaatcgggcaagaagtg
aaagtgaagctcaccgaagttcgcgtagaaactcgctcgattgtgggcaatattatctaa
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