Mannheimia varigena USDA-ARS-USMARC-1312: X874_11460
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Entry
X874_11460 CDS
T03028
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
X874_11460
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mvg01007
]
X874_11460
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvg03016
]
X874_11460
Enzymes [BR:
mvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
X874_11460
Amino acid related enzymes [BR:
mvg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
X874_11460
Transfer RNA biogenesis [BR:
mvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
X874_11460
Prokaryotic type
Other AARSs
X874_11460
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
AHG77782
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Position
complement(1236384..1237886)
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AA seq
500 aa
AA seq
DB search
MSAVENQELDLNGEMLARREKLTKIREQGNAFPNAFRRNALAKDLHAQYDEVEGEALKER
NIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLAESVYEEKVSLWDLGDIIGV
EGTLFKTKTGELTVRCSEVQLLTKALRPLPDKHHGLTDLETRYRQRYLDLISNEESRRTF
MIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFVTHHNALDVDMYLRIAPELYL
KRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRQLALD
ILGTTDVPYGEYVFDFGKPFERITMHDAIVKYGNGIQREDLDSFEKSVEIAKGLGIEIQK
SWGLGSVINAIFEEVAEHQLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIG
NGFSELNDAEDQAERFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAM
IFANAPSIRDVILFPAMRQK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtagaaaatcaagaattagatcttaatggggaaatgttagcccgtcgtgaa
aaattaactaaaattcgtgagcagggtaacgcttttccaaatgccttccgccgtaatgcg
ttagcaaaagatttgcatgctcaatatgatgaagtagaaggcgaagcattaaaagaacga
aatattcaagtgaaagttgctggccgtattatgctaaaacgagtgatgggcaaagcttct
ttctttactattcaagatgtgagtggtgctattcagctttacgtggctcgtgataatttg
gcggaaagcgtttatgaagaaaaagtgagcctttgggatttgggcgatattatcggcgtg
gaaggcacattattcaaaaccaaaaccggtgaattaaccgttcgttgttctgaagttcag
cttttaactaaagcgttgcgtccattgccggataaacaccacggcttaaccgacctagaa
actcgctatcgtcagcgttatttagatttaatttctaacgaagaatctcgccgtaccttt
atgattcgctcacaagtggtgtcaggcattcgcaaattcttcctagagagagattttatc
gaagtagaaaccccgatgttgcaagtgattccaggcggtgcggcggcgaaaccatttgtg
acccaccacaatgcgttagatgtggatatgtatttgcgtatcgctcctgaactttactta
aaacgtttggttgtgggtggttttgagcgtgtgtttgagttaaaccgtaacttccgtaat
gagggtgtttctgttcgtcacaaccctgaatttacgatgatcgaatactatcaagcctat
gcggattatcacgatttaatggataacaccgaagagctattacgccagttagccttggat
attcttggtacaactgacgtgccttacggtgaatacgtatttgatttcggcaagccattt
gagcgtatcacaatgcacgatgcgattgtgaaatacggcaacggcattcagcgtgaagat
ttagacagctttgaaaaatcggtggaaattgcaaaaggtttaggcattgaaattcaaaaa
tcgtggggcttaggctcggtgattaatgcgatttttgaagaagtggcagagcaccaatta
attcagccgacgttcttaatggcacaccctgcggaaatttcaccgcttgcacgccgtaat
gatgaaaatccggaagtgactgaccgcttcgagttattcattggcggtcgtgaaatcggt
aacggcttctcagaattaaacgatgcagaagaccaagcagagcgttttgatgctcaagtg
gctgcgaaagatgcaggcgatgatgaagcgatgtttaaagatgaagatttcgtggttgcc
cttgaacacggtctaccgccaacagcaggtgaaggtttagggattgaccgcttagcaatg
atttttgctaacgctccgtcaattcgtgatgtgattttattccctgcaatgcgtcagaaa
taa
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