Mannheimia varigena USDA-ARS-USMARC-1312: X874_12800
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Entry
X874_12800 CDS
T03028
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00061
Fatty acid biosynthesis
mvg00071
Fatty acid degradation
mvg01100
Metabolic pathways
mvg01212
Fatty acid metabolism
mvg02024
Quorum sensing
mvg04146
Peroxisome
Module
mvg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
X874_12800
00071 Fatty acid degradation
X874_12800
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
X874_12800
09145 Cellular community - prokaryotes
02024 Quorum sensing
X874_12800
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mvg01004
]
X874_12800
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvg04147
]
X874_12800
Enzymes [BR:
mvg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
X874_12800
Lipid biosynthesis proteins [BR:
mvg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
X874_12800
Exosome [BR:
mvg04147
]
Exosomal proteins
Exosomal proteins of breast milk
X874_12800
Exosomal proteins of breast cancer cells
X874_12800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHG77915
LinkDB
All DBs
Position
complement(1384422..1386113)
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AA seq
563 aa
AA seq
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MEKIWFNNYPPYSPKTIETNQYDSLVEMFEAAIKRHPDIPAYINMGQILTFRKLEERSRA
FAAYLQNELRLKKGDRIALMMPNLLQYPIALFGALRAGLVIVNVNPLYTPRELEHQLNDS
GAKAIVIISNFAATLEKIVFNTNIKHVILTRMGDQLSFGKRTLVNFVVKYIKKLVPKYKL
PHAVSFREALSIGKQRQYVKPNIINSDLAFLQYTGGTTGVAKGAMLTHQNLIANMMQAKW
IVEPLLGSTTNMIGLVPLPLYHVLALSLNCLLFIELGLTGLLITNPRDIPGFIKELKKYR
VSVITGVNTLFNALLNNDSFKEVDFSKLKLSVGGGAAIQSSVAKRWHDLTGIHIIEGYGM
TECSPLISATRSDSVEYSGSIGVPVPNTDIRIVDDEGNDVPLGERGELLVKGPQVMQGYW
NRPEDTAEVLKDGWMATGDIVIMGEDLNLRIVDRKKDMIIVSGFNVYPTEIEEVISQNPK
VNEVVAIGIPSEVSGESIKIFVTKKDESLTREELRSYCRQFLTGYKIPRDIEFRDELPKS
NVGKILRRVLRDEELAKSPGKNS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatatggtttaataattaccctccctattcgccaaaaacaattgaaacaaac
caatatgattcattagttgaaatgtttgaagccgctattaagcgccatccagatattcca
gcttatattaatatggggcagattcttactttccgtaaattagaagagagaagtagggca
tttgcagcctatttacaaaatgaattacgtttgaaaaagggtgatcgcatagcattgatg
atgcctaacttactacagtacccgatagcgttatttggcgcattgcgtgcaggattagta
attgttaatgtgaaccctctttatactccacgagaattagaacaccagctaaatgatagt
ggagcaaaagcgatagttattatttcaaactttgcagcaacattagaaaagattgtattt
aatacgaatattaaacatgtgattttaactcgaatgggcgatcagctttcatttggtaag
cgaacattagttaatttcgtggtgaaatatattaagaagttagtgcctaaatataagtta
ccgcacgctgtgagttttagggaagcattgagtattggtaagcaaagacaatatgtaaaa
ccgaatattataaatagtgatcttgcctttttacaatataccggtggaacaacgggtgta
gcaaaaggggcgatgcttactcaccaaaacttaattgcgaatatgatgcaagcgaagtgg
attgttgagcccctattagggagtacgactaatatgattggacttgttccattacctttg
tatcacgtattggcactttcattaaattgcttactctttattgaattaggtttaacaggt
ttattaatcactaatccacgtgatattcctggttttattaaagagctaaagaaatataga
gtttctgttattacaggcgtgaatacactatttaatgctttgctcaataatgacagcttt
aaagaggttgacttttctaaattgaaattgagtgtaggaggcggtgctgcgattcagtca
agtgtagcaaagcgttggcatgacttaactggcattcatattattgaaggttatggtatg
acagaatgttctccacttatttctgcaacacgcagtgattcggtagagtattcaggttct
ataggtgtacctgtgccaaatactgatattcggattgttgatgatgaaggtaatgatgtg
ccattaggcgaaagaggagaacttttagtaaaaggccctcaagtaatgcaaggctactgg
aaccgccctgaagacaccgccgaagtgctaaaagacggctggatggcaaccggtgacatc
gtgattatgggcgaagatctgaacctccgcattgtcgatcgcaaaaaagatatgatcatc
gtctcaggcttcaatgtttacccaactgaaattgaagaagtgatttcgcaaaacccgaaa
gtgaacgaagtggtggcaatcggtattccgagcgaagtttctggcgaaagtattaagatt
tttgtgacgaagaaagacgaaagtctcactcgtgaagagctgcgtagctactgccgccaa
ttcttaaccggctacaaaattcctcgtgatattgaatttcgtgatgaattgccgaaaagt
aatgttggcaaaattcttcgccgtgtattaagagatgaagagctggcaaaatcacctggc
aagaatagttaa
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