KEGG   Mannheimia varigena USDA-ARS-USMARC-1312: X874_13000
Entry
X874_13000        CDS       T03028                                 
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
mvg  Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00740  Riboflavin metabolism
mvg01100  Metabolic pathways
mvg01110  Biosynthesis of secondary metabolites
mvg01240  Biosynthesis of cofactors
mvg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mvg00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    X874_13000
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    X874_13000
Enzymes [BR:mvg01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     X874_13000
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     X874_13000
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AHG77935
LinkDB
Position
complement(1408119..1409282)
AA seq 387 aa
MQSFTKIPPFVLKITLSSRPPFIKICMTDAKYMAYAIELAKKAQGWTNPNPLVGCVIVKD
GNIVAEGYHEKYGEWHAERNAIFRSEQDLTGATAYVTLEPCCHYGRTPPCSDLLIERGIK
KVFIGSRDPNPLVSGKGAKQLRAAGVEVVEDFMRAECDELNPIFFHYIQTKRPYVLLKYA
MTADGKIATSTGESKWITGEQARAKVQETRHKYSSIMVGVETVLADDPMLNSRMPNAKQP
VRIVCDSQLRTPLDCKLMQTAKEYRTVIATLNDDVKIHKAYQQFGVEIIVTKADNKRVDL
LELLQKLGEMQIDSLLIEGGSSLNFSALKAGCVNRVHCYIAPKLIGGKEAKTPIGGEGIS
NLAEAVKLELKSTELIGDDILLDYVVK
NT seq 1164 nt   +upstreamnt  +downstreamnt
ttgcaaagttttactaaaattccaccgtttgtattgaaaataaccctttcatcacgccct
ccatttatcaaaatttgtatgacagacgctaaatatatggcttatgccatcgaacttgct
aaaaaagcccaaggctggacaaatccaaatccgttagtgggttgtgttatcgtgaaagac
ggtaacatcgtagcagaaggctaccacgaaaagtatggcgagtggcacgctgaacgcaat
gcgatttttcgctcggagcaagatttaacaggagctactgcctacgttacccttgagcct
tgttgccattatgggcgaacgccgccttgctccgatttattaatcgagcgaggcatcaaa
aaagtgtttattggctcacgagatcctaatccgctggtgtcgggcaaaggggcgaaacag
cttcgagcggccggtgtggaagtggttgaagattttatgcgagcagagtgcgatgagctg
aacccgattttctttcactacattcaaaccaaacgcccttatgtgttactgaaatatgcg
atgacggcggacgggaaaatagccacaagtacaggtgaatcaaaatggattacgggcgaa
caagctcgggcaaaagtacaagaaactcgccataaatacagctcaattatggtgggtgtt
gaaacagtattggctgatgacccaatgctcaacagccgaatgccaaatgccaagcagccc
gtgagaattgtttgtgatagtcagttaagaacaccattagattgcaaattaatgcaaacg
gcaaaagagtatcgcaccgtcatcgcaacattgaatgatgatgtgaaaatacataaagca
tatcaacaatttggtgtggaaattattgtaacaaaagcggataacaagcgggtagatttg
cttgaacttttgcaaaaactaggtgaaatgcaaattgacagtttgttaattgaaggtggc
tcaagcctgaatttcagtgcattaaaagcaggttgtgtaaaccgagtgcattgttatatt
gccccgaaattgattggtggtaaagaggctaaaaccccgattggtggcgaaggcattagc
aatttagctgaagcagtaaaattagaattgaagtccacagagttgattggcgacgatatt
ttgttggattatgttgttaagtaa

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