Mannheimia varigena USDA-ARS-USMARC-1312: X874_13120
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Entry
X874_13120 CDS
T03028
Name
(GenBank) UPF0142 protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvg03009
]
X874_13120
Ribosome biogenesis [BR:
mvg03009
]
Prokaryotic type
ribosomal protein modification factors
X874_13120
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AHG77947
LinkDB
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Position
1424033..1425898
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AA seq
621 aa
AA seq
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MNSVLSAEISQKIYLSMGIFARMLPFLRQIKGIIMSEQTFITGKDAALEDSIATFQHKLK
TLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSNGKGASKKAALASALGEYFERLSTNYF
WADFYLGQEIANGDFVHYPTEKWFPIEDEDVPPPEMMDDFLWEYFDPNGELTPELLVDLQ
SGNYDRGIVTLPYVRQSDNEIVYIPQSIIANLFVSNGMSAGNTKNEARVQGLSEVFERFV
KHRIITEAISLPEIPQSVIDGYPTIKASIEKLEQEGFPILCYDASLGGEFPVICVILLNP
QNGTCFASFGAHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANMETHFID
SSGLISWDLFKRDADYPFVHWDFSGTTEQEFSNMMAIFNKHNQPVYIMDYEHLGVYACRI
LAPGMSNIYPSDDLIYANNNMGLDWREILLALPHFHHDAETYQELLDELDEQSIDDLTRV
REFIGVVAEKGSAMQTLRIGELKSMLHLALGNLEQALDWANWTANMNASVFTAERNNYYR
CLISTIELFLDENREPTQYRSVFEKMYGEEAVEFAWNAVQGGNPFHGLTASDETLENMIA
HQKLLNAYRKVQKAKVNPIAR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgaactctgttctttcagcagaaatttcacaaaaaatttacttatctatggggattttt
gctagaatgttgccatttttacgacaaattaaaggtattataatgtcagaacaaactttt
attaccggtaaagatgctgcacttgaagacagcattgcgacctttcagcataaattaaaa
accttaggttttaacattgaagaagcgtcttggttaaatcctgtaccgaatgtgtggtca
gtgcatattcgtgatgcggattgtccgcagtgtttctcaaatggtaaaggcgcaagcaaa
aaagcagcgcttgcttctgcattaggtgagtatttcgagcgtttatcaaccaactatttc
tgggcagatttttatttaggtcaagagattgcgaacggcgattttgtgcattacccaacc
gaaaaatggttcccgattgaagatgaagatgtgcctccaccggaaatgatggacgatttc
ctttgggaatatttcgatccgaatggcgaacttacccctgaattattggttgatttgcaa
tcaggaaactatgatcgtggaatcgtcactttaccttacgttcgtcaatcagacaacgaa
atcgtttatattccacaaagcattatcgccaacttgttcgtgtcaaacggtatgtcggca
ggtaacaccaaaaatgaagctcgtgtgcaaggtttatccgaagtgttcgaacgtttcgtg
aaacatcgcattatcactgaagcgatcagcttacctgaaattccgcaatcggtgattgat
ggctatccaaccattaaggcttcgatcgaaaaattagagcaagaaggcttcccgattctt
tgctacgatgcgtcattaggcggcgaattcccggtgatttgtgtgattttactcaatccg
caaaacggcacttgctttgcatctttcggtgctcatccgaacttccaagtggcgttcgag
cgtaccgttaccgagcttctgcaaggtcgtagcctcaaagatttagatgtgtttgctcca
ccatctttcaacaatgaagatgtggcagatcacgccaatatggaaacccactttatcgac
tcaagcggtctgatttcttgggatcttttcaaacgtgatgcggattatccgttcgtgcat
tgggatttctccggcacaaccgagcaagaatttagcaatatgatggcgattttcaacaag
cacaatcagccggtttatattatggattatgagcatttaggtgtatatgcgtgtcgtatt
ttagccccgggaatgtcgaatatttacccaagcgatgatctcatctacgctaacaataat
atgggcttagattggcgtgaaatcttgttggctctaccacacttccaccacgatgcagaa
acttatcaagaattgcttgatgaattagacgagcaaagcattgatgatttaactcgtgta
cgtgaatttatcggcgtggtagcagaaaaaggctcggcaatgcaaaccttgcgtataggc
gaactaaaatcaatgcttcacttagctctcggcaacttagagcaagcattagattgggcg
aactggacggcaaatatgaatgccagcgtgttcaccgcagaacgcaacaactactaccgc
tgtttaatcagtaccattgagttattccttgatgaaaaccgtgagccgactcaataccgt
tctgtattcgagaaaatgtacggcgaagaagcggtagaatttgcatggaatgcggtgcaa
ggcggtaatccgttccacggtttaaccgcttctgacgaaacgcttgaaaatatgatcgct
catcagaaattactcaacgcttaccgcaaagtacagaaagcaaaagttaatccgattgcg
agataa
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