Mannheimia varigena USDA-ARS-USMARC-1312: X874_13760
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Entry
X874_13760 CDS
T03028
Name
(GenBank) ClpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mvg03110
]
X874_13760
Chaperones and folding catalysts [BR:
mvg03110
]
Heat shock proteins
HSP100
X874_13760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
nSTAND3
ATPase_2
RuvB_N
AAA_24
TniB
bpMoxR
AAA_7
NBD_SMAX1
IstB_IS21
NACHT
AAA_18
DUF815
AAA_25
AAA_19
Torsin
Motif
Other DBs
NCBI-ProteinID:
AHG78011
LinkDB
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Position
1485606..1488173
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AA seq
855 aa
AA seq
DB search
MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALVKQDGGSVAPLFTALNINVQTL
ISELQAILDRFPQVQGGNTQVSQQLVRLLNQSDKLAQQFGDSFISSELFVLASIEDNGDL
GKLWKKFGLSKEKLTQAISQIRGGENVNNQNAEETRQALKKYTIDLTERAKSGKLDPVIG
RDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDM
GALIAGAKYRGEFEERLKAVLNELTKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPS
LARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHH
VQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQL
KLERQALQKEEDEASRQRLAKLDEEMAAKEREYSELEEIWKAEKSTLLGTQHIKEELENA
RIAMDQARRENNFEKMSELQYGVIPNLEKQLQAVENGEKNAETQLLRTKVTEEEIAEVLS
KATGIPVSKMMEGEKEKLLRMEEVLHARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSF
LFLGPTGVGKTELSKTLAHFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY
LTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG
SHLIQENAHKGYDAVKEMVMEVVGHHFRPEFINRIDETVMFHSLGKEHIRSIAKIQLQRL
ITRLAERGYSLIVTDAALDHIGNAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNK
PVTVDYQDGRIVATQ
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgagaagatgaccacaaaactgcaagaagcattggcagagtcccaatcgctt
gcggttggaaaagataacccttatatcgaacctgcccatttactatatgcgttagtgaaa
caagatggtggttctgttgccccactctttacggcattaaatatcaatgtgcagaccttg
attagcgaattgcaagccatcttagaccgctttccacaagttcaaggtgggaacacgcaa
gtttcacagcaattagtgagattgttaaatcaatctgacaagttggcacagcaatttggg
gacagttttatttcctctgaattgtttgtgttggcaagcattgaggataatggcgattta
ggaaaattatggaaaaaatttggcttgagcaaagaaaaactcacccaagcaattagccaa
attcgaggaggagaaaacgtgaataatcaaaatgcggaagaaacccgccaagcattgaaa
aaatatacgattgatttaaccgagcgagccaaatctggtaagttagatccggttatcggg
cgtgatgaagaaatccgtcgtgccgtacaagtgttacaacgccgtacaaaaaataacccc
gtgcttatcggtgaaccgggcgtaggtaaaacagcaattgtagagggattggctcaacgc
attgtcaatggcgaagtgccggaaggtttgaaaaacaaacgtgtactttctcttgatatg
ggcgcattaattgccggggcaaaatatcgtggcgaatttgaagagcgtttaaaagccgtt
ttaaacgaacttaccaaagaagaaggacaagtgatcctctttattgatgaaattcacaca
atggtgggagcaggtaaaaccgacggggcaatggatgctggtaacttgctcaaaccaagc
cttgctcgaggcgaattacactgcgttggggcaactactcttgatgaatatcgtcaatac
attgagaaagatgccgcccttgaacgccgtttccaaaaagtgttagttgatgaaccgacg
gtggaagataccattgcaattttgcgtggtttgaaagagcgttatgaaatccatcatcac
gtgcaaattacagacccagccattgtggcagctgcaacactttcgcaccgttatgtatct
gaccgccaattaccagataaagcgattgacttgattgatgaagcagcttcaagtctgcgt
atggaaattgattccaaaccggagccgttggataaattagaacgccgtattattcagctc
aaattggaacgccaagcgttacaaaaagaggaagatgaagccagccgtcaacgtttagcg
aaattagacgaagaaatggcagccaaagagcgtgaatattcggagctggaagaaatttgg
aaagcggaaaagtccaccttgcttggcacgcaacacattaaagaagagttggaaaacgct
cgcattgcgatggatcaagctcgccgtgagaacaactttgagaaaatgtctgagttgcaa
tatggcgtgattccaaacttagaaaagcagttacaagcggtcgaaaatggcgaaaaaaat
gcagaaacgcaattacttcgcactaaagtaaccgaagaagaaattgccgaagtgctttca
aaagcgactggcattcctgtttctaagatgatggaaggcgagaaggaaaaactccttcgt
atggaagaggtattgcacgctcgtgttatcgggcaaaatgaagcggttgatgcggtggca
aatgcgattcgccgtagccgtgcagggctttctgatccgaataaaccgattggttcgttc
ttatttttaggcccgaccggcgtgggtaaaacggaattaagcaaaacattagcccacttc
ttgtttgatgaccctgatgcaatggtgcgtattgatatgtctgagtttatggaaaaacac
agcgtatctcgcttagtaggagcacctccgggctatgtgggctatgaagaaggtggttac
ttaaccgaagcggttcgccgtcgtccatactctgtagttctacttgacgaagtggagaaa
gcccaccctgatgtgtttaacattttactgcaagtgctagatgacgggcgtttaaccgat
ggtcaaggcagaaccgtggatttccgtaataccgttgtgattatgacatcaaacttaggc
tcgcacctcattcaagagaatgcacataaaggctatgatgcggttaaagagatggtaatg
gaagttgttggacaccatttccgccctgaatttattaaccgtattgatgaaacagtaatg
ttccactcgttaggaaaagagcatatccgctcgattgcgaaaattcagctacaacgctta
attactcgcttagcagaacgtggttatagcctaatcgtaaccgatgcagctttagatcat
atcggcaatgcaggctttgacccattatttggagcaagaccacttaaacgtgcaattcaa
caagagcttgaaaatccacttgctcaacagattttaagcggtaaattattaccaaataaa
cctgtaacggtggattaccaagacgggcgaattgtggcaactcagtaa
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