Mannheimia varigena USDA-ARS-USMARC-1312: X874_14120
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Entry
X874_14120 CDS
T03028
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
X874_14120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvg03019
]
X874_14120
03009 Ribosome biogenesis [BR:
mvg03009
]
X874_14120
Messenger RNA biogenesis [BR:
mvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
X874_14120
Ribosome biogenesis [BR:
mvg03009
]
Eukaryotic type
Pre-60S particles
RNases
X874_14120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHG78047
LinkDB
All DBs
Position
complement(1528288..1528842)
Genome browser
AA seq
184 aa
AA seq
DB search
MSQDAQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAVHQSDELLGKMSD
WCVKTHTANGLIERVKASKLTERAAELQTIDFLKRWVPKGSSPICGNSIAQDKRFLYKYM
PDLADYFHYRHLDVSTLKELVRRWKPEILDNFSKGNTHLALDDIRESINELKFYREHFIN
LDEK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagatgcacaaaatctgatttggatcgatcttgaaatgacaggcttagatccg
gaaaaagaacgcattatcgaaattgccactatcgtaaccgataaagatctgaatatttta
gcggaaggtccggttttggcggttcatcaatctgatgaattattaggaaaaatgagtgat
tggtgtgtgaaaacccatacggcaaacggcttaattgagcgagtgaaagcgagtaaactc
actgagcgtgcggcagaattacaaactattgatttcttaaagcgttgggtgccaaaagga
agttcgccaatttgtggcaacagtattgcacaggataaacgtttcctttataaatatatg
cctgatttagcggattatttccactaccgccatttagacgtgagtacgctcaaagagttg
gtaagacgctggaagccagaaattctcgacaacttcagcaaaggtaatacgcacttggcg
ttagacgatattcgtgaatccatcaacgaattaaaattttatcgggaacattttattaat
ttagacgaaaaataa
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