Mannheimia varigena USDA-ARS-USMARC-1312: X874_14760
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Entry
X874_14760 CDS
T03028
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvg03032
]
X874_14760
03400 DNA repair and recombination proteins [BR:
mvg03400
]
X874_14760
Enzymes [BR:
mvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
X874_14760
DNA replication proteins [BR:
mvg03032
]
Prokaryotic type
DNA Topoisomerases
X874_14760
DNA repair and recombination proteins [BR:
mvg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X874_14760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Peptidase_M13_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
AHG78110
LinkDB
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Position
complement(1603768..1606458)
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AA seq
896 aa
AA seq
DB search
MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTYN
KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM
RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT
NIPPHNLGEVLDGCLAYIENENISVEELMAHIPGPDFPTGAIINGRKGIEEAYRTGRGKV
YVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKIADLVKEKKIEGISKIDDYSDKKGI
SIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLRQIIEAFVKHRREV
VTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTAEDAREGLLARPWALGNVA
PMLEAAGVDASRPEDLPENLGVCDGQYYLSEAQARAILELRLHRLTGLEHEKIVEEYKEL
LTEIGELLRILNSADRLMEVIREELELVKATFNDERRTEITAASGDINIEDLIAQEDVVV
TLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQ
LKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNGEFSADKFIFMATASGVVKK
VSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRFAEKAVRAMGRT
ATGVRGIKLATTEISAEEIEEAEIIEIENEEAEDTSSVSLDTDRVVSLVIPRTAGDILTV
TQNGYGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDAGTLVRT
RVAEVSLVGRNTQGVRIIRTAEDEQVVSLERVCEPEEDDETTEAFDAETVETSTEE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattagccaaagatattattcccgtaagtattgaggacgaattaaaaacctct
taccttgactacgcaatgtcggtgattgttgggcgtgcattgcctgatgtgcgtgacggc
ttgaaaccggttcaccgccgtgtgcttttctcaatggatcaaaacagcaacacctataac
aaaccacacgtgaaatcagcccgtgtggtgggggatgtgatcggtaaataccacccgcac
ggtgactcagcggtgtacgacaccattgtgcgtatggctcagccgttctcacttcgttat
atgttagtggacggtcaaggtaacttcggttctatcgatggcgatgctccggcggcaatg
cgttataccgaagtgcgtatgcagaaaattacgcaggaattgctcaccgatttagacaaa
gaaacagtagatttctcgccaaactatgacggcaaagagatgattcctgatgtgttgcca
accaaaattccagccttgttagtgaacggttcatcggggattgcggtgggtatggcaacc
aatattccgcctcacaatttaggcgaagtgttagacggctgcttggcatacattgaaaat
gaaaatatcagcgtggaagagctaatggctcacattcccggcccggatttccctacaggg
gcgattattaacggtcgtaaagggatcgaagaagcctaccgtaccggtcgtggcaaggtg
tatgtgcgtgcgaaagcgagcgtagaaaccaccgacaaagggcgtgagcagattgtggtg
actgaacttccataccaagtcaataaagcgaaattgatcgaaaaaatcgccgatttggtg
aaagagaagaaaatcgaaggcatcagcaaaatcgatgactattccgacaaaaaagggatc
tcgattgttattgaagtcaaacgtgatgcagtgggcgaagtggtgttaaatcacctctat
tctttaacccaaatgcaagtgaccttcggtattaatatggtggcgttggacaacggtcag
ccgaaagtgttgaacctccgccaaatcattgaagccttcgtgaaacaccgccgtgaagta
gtgactcgccgtaccatctttgaattacgcaaagcgcgtgaacgtgcccatattttagaa
ggcttggcgattgcattagcgaacatcgacccggttatcgaattaattcgtgcctcaaaa
accgcagaagatgcccgtgaaggcttattggctcgtccttgggcattgggtaatgttgct
ccaatgttagaggcggcaggcgtagatgcttctcgtccggaagatttaccggaaaattta
ggcgtgtgtgatggtcaatactatttatcagaagcccaagcccgtgcaattttagagtta
cgcttacaccgtttaaccggcttagaacacgaaaaaatcgttgaagagtacaaagaatta
ttaaccgaaatcggcgaattattacgcattttaaacagtgcagatcgcttgatggaagtg
atccgtgaagagttagagttagtgaaagcgacctttaacgatgaacgccgcacagaaatt
accgcagcctcaggcgacatcaacattgaagatttaatcgctcaagaagatgtggtggta
acgctttctcacgcaggctatgtgaaatatcagccgctttcagactatgaagcccaacgc
cgtggcggtaaagggaagtcggcaaccaagatgaaagaagatgatttcatcgaaaaatta
ttggtggcgaatacccacgacaccattctctgcttctcaagccgtggtcgcttatatcaa
ttaaaagtgtaccaattaccgcaagccagccgtggggcaagaggcacgccgattgtgaat
attctgccgttggtgaaagaagagaacgagcgtattaccgcaatcctgccgattccaaat
ggcgaatttagtgctgataaatttatctttatggcaactgcaagcggcgtggtgaaaaaa
gtctcgctagatgcgttcagcaacgttcgttcaagcggtctaattgcattaaaacttcgc
gaaggcgatgaattaatcggtgtggatattaccgatggcgagagcgaaattatgctcttc
tcggcacaaggtcgagtggttcgcttcgcagaaaaagctgtgcgtgcaatgggacgtacc
gcaacaggggtgcgtggtattaaacttgcaacgactgaaatttcagcagaagagatcgaa
gaagctgaaattatcgaaattgaaaacgaagaggcggaagatacttcaagcgtgagccta
gacactgaccgtgtagtttctcttgtgattcctcgtaccgcaggcgatattctcactgtc
acccaaaacggctacggaaaacgtaccgtcattggcgaatatccggtgaaatcccgtgca
accaaaggggtagtgtcaatcaaagtgaacgaacgcaacggtaaagtggtagctgcagtt
caagtggaagaaaccgaccaaattatgctgattaccgatgccggcacgctagttcgcact
cgagtggcggaagtgagcttagttggacgaaatacccaaggcgttcgcattatccgcacc
gcagaagacgaacaggttgtgagcctagagcgagtttgcgaaccggaagaggacgatgaa
acgacagaagcattcgatgcggaaaccgtagaaacctcaaccgaagaataa
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