Mannheimia varigena USDA-ARS-USMARC-1312: X874_15110
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Entry
X874_15110 CDS
T03028
Name
(GenBank) rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvg03009
]
X874_15110
03016 Transfer RNA biogenesis [BR:
mvg03016
]
X874_15110
Ribosome biogenesis [BR:
mvg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X874_15110
Transfer RNA biogenesis [BR:
mvg03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
X874_15110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Ses_B
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AHG78146
LinkDB
All DBs
Position
complement(1644690..1645718)
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AA seq
342 aa
AA seq
DB search
MNTKFNKAPRLKTVEEKKFQERPSFKSQERKPRQESERKPERRSFREERTFEKPQNIYPS
EGRKASGEGSVQIWVKGGNAVSNEKKTGPLSPRAPEKIKKNRAEEMKVYGENACLALFQQ
RPEAIVRLWATVEGAKKLGEMMRYLAENKKAYHVIDREEMERVTGTEHHGDMCLLVKKSP
SFVLEGYLQVPKKQDCLVLLDGVNNAQNVGGIVRTCAFYGVKGVIVESGDTLNSSAAARV
AEGGLEFVRALETKNKQIALVQLRQAGYQIVHLTRHKQAPSLTKTKLAEKVVFVLSEIPA
SEIAYTEDTTIQLSFSNPLNSGLNVAVNTGILLNQWYQTHIL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaaatttaacaaagctccacgtctcaaaaccgtggaagagaaaaaattccaa
gagcgtccgtcattcaaatcgcaagagagaaaaccacgtcaagagagcgagcgtaaacct
gaacgccgtagttttcgtgaagagagaacatttgaaaagccacaaaacatctacccaagc
gagggcagaaaagcgagtggtgaggggagtgtacagatctgggtgaaaggcggaaatgcc
gtttctaacgagaagaaaaccgggccgctttcgcctcgagcaccggaaaaaatcaagaaa
aatcgtgcggaagagatgaaagtttatggcgaaaatgcctgccttgctttgtttcagcaa
cgtcctgaagcgattgtgcgtttatgggcaacggttgaaggggcgaaaaagctcggtgaa
atgatgagatatttggcggagaacaaaaaggcctaccacgttatcgatcgtgaagaaatg
gagcgtgtcaccggcacggaacaccacggcgatatgtgcttgctcgtgaaaaaatcgccg
tcatttgtgctggaaggctacttgcaagtgccgaaaaaacaagattgtttggtgttgtta
gacggcgtgaataatgctcaaaatgtgggtggcattgtgcggacttgtgccttttacggc
gtgaaaggcgtgattgtggaaagtggagatacgcttaattccagtgctgctgcccgtgtg
gcagagggcggtttggaatttgtgcgtgctttagaaactaagaataagcaaattgcttta
gtgcagttacgccaagcaggttatcaaattgtgcatctaacccgccataaacaagctcca
tctttaaccaaaacgaaattagcagaaaaagtggtctttgtattaagtgaaattccagca
agtgagattgcttatacggaagataccaccattcagctttcatttagcaatccgttaaat
agtggtttaaatgtggcagttaataccggtattctgctgaaccaatggtatcaaacccat
attctctaa
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