Mannheimia varigena USDA-ARS-USMARC-1312: X874_15910
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Entry
X874_15910 CDS
T03028
Name
(GenBank) HTH-type transcriptional regulator CysB
KO
K13634
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvg03000
]
X874_15910
Transcription factors [BR:
mvg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
X874_15910
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AHG78225
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Position
complement(1718689..1719672)
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AA seq
327 aa
AA seq
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MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESELGVNIFERNGKHVKGLT
PAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGVLRIATTNTQARYMLPEVIEKFKARYP
EVSLHLHQGSPNQIYDALMAGEVDLAITTEAQYLFEEAILLPCYWWNRSVIVKPDHPLAT
FVNQSRDLTVEELGKYDLITYTFGFTGQSDLDHAFNKEGILPNIVFTATDADVIKTYVRL
GLGVGIMAAMAHTEADKDLVAINASHLFQPSMTQIAFKRGTFLRNYMYDFINYFSPHLTR
VQVEKAEQLRDNNAISRLFERVSLEEK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacagcagctacgttacattgtggagatagtaaaccaaaatttgaatattact
gaagccgcagaagtgctttatacatcccaaccgggcattagtaagcaggttcgcttatta
gaaagtgagttaggggttaatatttttgaacgtaacggtaagcacgttaaaggattaaca
cctgcaggtgagaaaatcgtagccattgctcgtgagttattggttaaagctcagagtatt
aagtctgtagcagaagagcaaactcgcccgaataaaggtgttttacgcattgcgacaact
aatactcaagctcgttatatgttgcctgaggtcattgaaaagttcaaagctcgttatccg
gaagtaagtttgcatttgcatcaaggttcgccaaaccaaatttatgatgcgttaatggca
ggcgaggtggatttggcgattactactgaggctcaatacctgtttgaagaggcgattttg
ttgccgtgctactggtggaatcgttcagttattgttaaaccggatcacccattggcaact
tttgtgaaccaaagccgagatttaactgtcgaagaactaggtaaatatgatttgatcacc
tacacctttgggtttacggggcaatcagatttagatcacgcattcaataaagaaggaatt
ttgccaaatattgtgtttaccgcaaccgatgcagatgtgattaaaacttatgtccgttta
ggtttaggggtgggaattatggcagcaatggcacatactgaagcagataaagatttagtc
gcaatcaatgcaagccatttatttcagccaagtatgactcaaatcgcatttaaacgaggg
acattccttcgtaattatatgtatgattttattaattatttttcgccacatttaacacga
gtgcaagtggagaaagccgaacaattacgagataacaatgcaatctcaagattgtttgaa
cgtgtatctttagaggagaagtag
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integrated database retrieval system
