Mannheimia varigena USDA-ARS-USMARC-1312: X874_16850
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Entry
X874_16850 CDS
T03028
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvg03021
]
X874_16850
Transcription machinery [BR:
mvg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X874_16850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AHG78319
LinkDB
All DBs
Position
complement(1812252..1813214)
Genome browser
AA seq
320 aa
AA seq
DB search
MKKFDENEIEDAEIVEAEPIAPEEIAEHESEMAEPMHPALVSASMPVPQGNLDSYIRMAN
QYPILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARGYLGYGLPLADLIQEGNI
GLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVKVATTKAQRKLFFNLRKNKN
RLAWFNEEEIKKVADDLGVTVEEVREMESRMTGQDLGFDLPVGEDDDEAYVPSMYIEDNS
SNFADDLEDEQHNGQATAQLAYALATLDERSQDIIKTRWLDDNKATLQDLADKYNISAER
VRQLENAALKKIKEAITLEE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgacgaaaacgagattgaagatgcggagattgtcgaagcggaaccgatt
gcgccggaagaaattgccgagcacgaaagcgaaatggcggagccgatgcaccctgctttg
gtttcggcttcaatgccggtgccgcaaggtaatttggacagctatatccgaatggcgaac
cagtatccgattctcaccgccgagcaagaaaaagagctggcggagcgttattattacgat
gaagatgttgaagcggcaaagcagctgattctgtcgcatatgcggtttgtgatccatatc
gcccgaggctacttaggctacggcttaccgctggcggatctgatccaagagggcaatatc
ggcttgatgaaagcggtaaaacgctttgatccgaacgttggtgtgcgtttagtttctttt
gcggtacattgggtgaaggcggaaatccacgaatatgtgttgaaaaactggcgaattgtg
aaagtggcgaccaccaaagctcaacgcaaactgtttttcaatttacgcaaaaataaaaac
cgcttagcgtggttcaatgaagaagagattaaaaaagtggcggatgatttgggcgtaacg
gttgaagaagtgcgtgaaatggagtctcgaatgaccgggcaagatctcggttttgacttg
ccggtaggcgaagatgatgatgaagcctacgttccttcaatgtatattgaagataacagc
tccaattttgcggacgatttggaagatgaacagcacaacgggcaagcaaccgctcagctg
gcttatgctttagcaactctcgatgaacgtagccaagacattattaaaactcgctggctg
gacgacaacaaagcaaccttgcaagatttggcggataaatacaacatctccgccgaacgt
gtccgccaactggaaaatgctgcattaaagaaaatcaaagaagcgattacgctagaagag
tag
DBGET
integrated database retrieval system
