Mannheimia varigena USDA-ARS-USMARC-1312: X874_17880
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Entry
X874_17880 CDS
T03028
Name
(GenBank) Protein hfq
KO
K03666
host factor-I protein
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg02024
Quorum sensing
mvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X874_17880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X874_17880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvg03019
]
X874_17880
03036 Chromosome and associated proteins [BR:
mvg03036
]
X874_17880
Messenger RNA biogenesis [BR:
mvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
X874_17880
Chromosome and associated proteins [BR:
mvg03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
X874_17880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Gag_p24_C
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AHG78422
LinkDB
All DBs
Position
1908730..1909005
Genome browser
AA seq
91 aa
AA seq
DB search
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARALSHNNNNNHSQQAQPAAEVAEQAE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtcaatctttacaagatccatatttgaatgcacttcgccgtgagcgtatt
ccggtttcaatttatttagtaaacggcattaaattacaaggtcagatcgaatcattcgac
caattcgtgatcttgctaaaaaacacggtgagccaaatggtgtataaacacgctatttca
acagttgtgccggctcgtgcgttgtcgcataacaacaataacaaccacagccaacaagct
caaccagcggctgaagttgctgaacaagcggaataa
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integrated database retrieval system
